Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9n-2A0A0G2JDP3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9n-2A0A0G2JDP3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Gm6821-201ENSMUST00000107540 542 ntBASIC16.83■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.82■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.82■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-2A0A0G2JDP3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-2A0A0G2JDP3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9n-2A0A0G2JDP3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.76■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Particl-201ENSMUST00000205370 1560 ntBASIC16.73■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9n-2A0A0G2JDP3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav9n-2A0A0G2JDP3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9n-2A0A0G2JDP3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav9n-2A0A0G2JDP3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.68■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Gm8503-201ENSMUST00000118131 455 ntBASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-2A0A0G2JDP3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-2A0A0G2JDP3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms