Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-20A0A0A6YX66 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-20A0A0A6YX66 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-20A0A0A6YX66 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.8■□□□□ 0.6
Ighv1-20A0A0A6YX66 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.8■□□□□ 0.6
Ighv1-20A0A0A6YX66 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.8■□□□□ 0.6
Ighv1-20A0A0A6YX66 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-20A0A0A6YX66 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.79■□□□□ 0.6
Ighv1-20A0A0A6YX66 Mir3960-201ENSMUST00000198213 73 ntBASIC18.79■□□□□ 0.6
Ighv1-20A0A0A6YX66 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.78■□□□□ 0.6
Ighv1-20A0A0A6YX66 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.78■□□□□ 0.6
Ighv1-20A0A0A6YX66 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-20A0A0A6YX66 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-20A0A0A6YX66 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-20A0A0A6YX66 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-20A0A0A6YX66 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-20A0A0A6YX66 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-20A0A0A6YX66 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-20A0A0A6YX66 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.75■□□□□ 0.59
Ighv1-20A0A0A6YX66 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.75■□□□□ 0.59
Ighv1-20A0A0A6YX66 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-20A0A0A6YX66 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.74■□□□□ 0.59
Ighv1-20A0A0A6YX66 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-20A0A0A6YX66 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.74■□□□□ 0.59
Ighv1-20A0A0A6YX66 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-20A0A0A6YX66 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-20A0A0A6YX66 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-20A0A0A6YX66 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-20A0A0A6YX66 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Ighv1-20A0A0A6YX66 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.73■□□□□ 0.59
Ighv1-20A0A0A6YX66 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.72■□□□□ 0.59
Ighv1-20A0A0A6YX66 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.72■□□□□ 0.59
Ighv1-20A0A0A6YX66 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.72■□□□□ 0.59
Ighv1-20A0A0A6YX66 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-20A0A0A6YX66 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-20A0A0A6YX66 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-20A0A0A6YX66 Mir6538-201ENSMUST00000183713 110 ntBASIC18.71■□□□□ 0.59
Ighv1-20A0A0A6YX66 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-20A0A0A6YX66 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-20A0A0A6YX66 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-20A0A0A6YX66 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-20A0A0A6YX66 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-20A0A0A6YX66 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-20A0A0A6YX66 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-20A0A0A6YX66 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-20A0A0A6YX66 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.69■□□□□ 0.58
Ighv1-20A0A0A6YX66 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-20A0A0A6YX66 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
Ighv1-20A0A0A6YX66 Gm11175-201ENSMUST00000116172 543 ntBASIC18.68■□□□□ 0.58
Ighv1-20A0A0A6YX66 Gm45364-201ENSMUST00000210883 159 ntBASIC18.68■□□□□ 0.58
Ighv1-20A0A0A6YX66 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-20A0A0A6YX66 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.68■□□□□ 0.58
Ighv1-20A0A0A6YX66 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.68■□□□□ 0.58
Ighv1-20A0A0A6YX66 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-20A0A0A6YX66 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-20A0A0A6YX66 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.67■□□□□ 0.58
Ighv1-20A0A0A6YX66 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.67■□□□□ 0.58
Ighv1-20A0A0A6YX66 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-20A0A0A6YX66 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-20A0A0A6YX66 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ighv1-20A0A0A6YX66 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-20A0A0A6YX66 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ighv1-20A0A0A6YX66 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-20A0A0A6YX66 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-20A0A0A6YX66 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-20A0A0A6YX66 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-20A0A0A6YX66 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-20A0A0A6YX66 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv1-20A0A0A6YX66 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv1-20A0A0A6YX66 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ighv1-20A0A0A6YX66 Scarna2-201ENSMUST00000157560 414 ntBASIC18.64■□□□□ 0.57
Ighv1-20A0A0A6YX66 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-20A0A0A6YX66 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-20A0A0A6YX66 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-20A0A0A6YX66 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.63■□□□□ 0.57
Ighv1-20A0A0A6YX66 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-20A0A0A6YX66 Gm9806-201ENSMUST00000051080 552 ntBASIC18.63■□□□□ 0.57
Ighv1-20A0A0A6YX66 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-20A0A0A6YX66 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-20A0A0A6YX66 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-20A0A0A6YX66 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-20A0A0A6YX66 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-20A0A0A6YX66 Gm11687-201ENSMUST00000118911 886 ntBASIC18.62■□□□□ 0.57
Ighv1-20A0A0A6YX66 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-20A0A0A6YX66 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-20A0A0A6YX66 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-20A0A0A6YX66 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-20A0A0A6YX66 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-20A0A0A6YX66 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-20A0A0A6YX66 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ighv1-20A0A0A6YX66 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-20A0A0A6YX66 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-20A0A0A6YX66 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-20A0A0A6YX66 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-20A0A0A6YX66 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-20A0A0A6YX66 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-20A0A0A6YX66 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-20A0A0A6YX66 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ighv1-20A0A0A6YX66 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-20A0A0A6YX66 Gm9812-201ENSMUST00000061934 968 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms