Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trbc1A0A0A6YWV4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Trbc1A0A0A6YWV4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trbc1A0A0A6YWV4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trbc1A0A0A6YWV4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.32■■□□□ 1
Trbc1A0A0A6YWV4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.32■■□□□ 1
Trbc1A0A0A6YWV4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.32■■□□□ 1
Trbc1A0A0A6YWV4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.32■■□□□ 1
Trbc1A0A0A6YWV4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Trbc1A0A0A6YWV4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trbc1A0A0A6YWV4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trbc1A0A0A6YWV4 Gm11599-201ENSMUST00000118720 878 ntBASIC21.31■■□□□ 1
Trbc1A0A0A6YWV4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trbc1A0A0A6YWV4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.3■■□□□ 1
Trbc1A0A0A6YWV4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Trbc1A0A0A6YWV4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trbc1A0A0A6YWV4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Trbc1A0A0A6YWV4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trbc1A0A0A6YWV4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.29■■□□□ 1
Trbc1A0A0A6YWV4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trbc1A0A0A6YWV4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trbc1A0A0A6YWV4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trbc1A0A0A6YWV4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.28■■□□□ 1
Trbc1A0A0A6YWV4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trbc1A0A0A6YWV4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Trbc1A0A0A6YWV4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbc1A0A0A6YWV4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbc1A0A0A6YWV4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbc1A0A0A6YWV4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbc1A0A0A6YWV4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trbc1A0A0A6YWV4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trbc1A0A0A6YWV4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trbc1A0A0A6YWV4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbc1A0A0A6YWV4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trbc1A0A0A6YWV4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trbc1A0A0A6YWV4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trbc1A0A0A6YWV4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trbc1A0A0A6YWV4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.22■□□□□ 0.99
Trbc1A0A0A6YWV4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trbc1A0A0A6YWV4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trbc1A0A0A6YWV4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trbc1A0A0A6YWV4 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.2■□□□□ 0.98
Trbc1A0A0A6YWV4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trbc1A0A0A6YWV4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trbc1A0A0A6YWV4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trbc1A0A0A6YWV4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Trbc1A0A0A6YWV4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbc1A0A0A6YWV4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trbc1A0A0A6YWV4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbc1A0A0A6YWV4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trbc1A0A0A6YWV4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trbc1A0A0A6YWV4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.16■□□□□ 0.98
Trbc1A0A0A6YWV4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trbc1A0A0A6YWV4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trbc1A0A0A6YWV4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.15■□□□□ 0.98
Trbc1A0A0A6YWV4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trbc1A0A0A6YWV4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trbc1A0A0A6YWV4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Trbc1A0A0A6YWV4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trbc1A0A0A6YWV4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trbc1A0A0A6YWV4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trbc1A0A0A6YWV4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trbc1A0A0A6YWV4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trbc1A0A0A6YWV4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Trbc1A0A0A6YWV4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trbc1A0A0A6YWV4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trbc1A0A0A6YWV4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trbc1A0A0A6YWV4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.11■□□□□ 0.97
Trbc1A0A0A6YWV4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trbc1A0A0A6YWV4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trbc1A0A0A6YWV4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.1■□□□□ 0.97
Trbc1A0A0A6YWV4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trbc1A0A0A6YWV4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trbc1A0A0A6YWV4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trbc1A0A0A6YWV4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trbc1A0A0A6YWV4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trbc1A0A0A6YWV4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trbc1A0A0A6YWV4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trbc1A0A0A6YWV4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.08■□□□□ 0.97
Trbc1A0A0A6YWV4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trbc1A0A0A6YWV4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trbc1A0A0A6YWV4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trbc1A0A0A6YWV4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trbc1A0A0A6YWV4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trbc1A0A0A6YWV4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trbc1A0A0A6YWV4 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.06■□□□□ 0.96
Trbc1A0A0A6YWV4 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.06■□□□□ 0.96
Trbc1A0A0A6YWV4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trbc1A0A0A6YWV4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trbc1A0A0A6YWV4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trbc1A0A0A6YWV4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trbc1A0A0A6YWV4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trbc1A0A0A6YWV4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trbc1A0A0A6YWV4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trbc1A0A0A6YWV4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trbc1A0A0A6YWV4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trbc1A0A0A6YWV4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trbc1A0A0A6YWV4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trbc1A0A0A6YWV4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trbc1A0A0A6YWV4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms