Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.86■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.85■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13-4-dv7A0A075B6C2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.82■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.77■□□□□ 0.12
Trav13-4-dv7A0A075B6C2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Zfp131-205ENSMUST00000223812 663 ntBASIC15.74■□□□□ 0.11
Trav13-4-dv7A0A075B6C2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms