Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-2A0A075B649 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-2A0A075B649 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-2A0A075B649 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-2A0A075B649 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-2A0A075B649 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13-2A0A075B649 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-2A0A075B649 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-2A0A075B649 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-2A0A075B649 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13-2A0A075B649 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav13-2A0A075B649 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-2A0A075B649 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-2A0A075B649 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-2A0A075B649 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-2A0A075B649 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13-2A0A075B649 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav13-2A0A075B649 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-2A0A075B649 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-2A0A075B649 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-2A0A075B649 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Trav13-2A0A075B649 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-2A0A075B649 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13-2A0A075B649 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13-2A0A075B649 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-2A0A075B649 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-2A0A075B649 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-2A0A075B649 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13-2A0A075B649 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13-2A0A075B649 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-2A0A075B649 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-2A0A075B649 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-2A0A075B649 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-2A0A075B649 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13-2A0A075B649 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-2A0A075B649 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-2A0A075B649 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-2A0A075B649 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13-2A0A075B649 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-2A0A075B649 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-2A0A075B649 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-2A0A075B649 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-2A0A075B649 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13-2A0A075B649 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13-2A0A075B649 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13-2A0A075B649 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-2A0A075B649 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-2A0A075B649 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav13-2A0A075B649 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-2A0A075B649 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13-2A0A075B649 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-2A0A075B649 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-2A0A075B649 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav13-2A0A075B649 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-2A0A075B649 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-2A0A075B649 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13-2A0A075B649 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.38■□□□□ 0.05
Trav13-2A0A075B649 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-2A0A075B649 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-2A0A075B649 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13-2A0A075B649 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-2A0A075B649 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-2A0A075B649 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-2A0A075B649 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13-2A0A075B649 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav13-2A0A075B649 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13-2A0A075B649 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13-2A0A075B649 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13-2A0A075B649 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13-2A0A075B649 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13-2A0A075B649 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms