Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8-1A0A075B641 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8-1A0A075B641 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8-1A0A075B641 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8-1A0A075B641 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8-1A0A075B641 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8-1A0A075B641 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8-1A0A075B641 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8-1A0A075B641 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8-1A0A075B641 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav8-1A0A075B641 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8-1A0A075B641 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8-1A0A075B641 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8-1A0A075B641 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8-1A0A075B641 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8-1A0A075B641 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.56■□□□□ 0.24
Trav8-1A0A075B641 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8-1A0A075B641 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav8-1A0A075B641 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8-1A0A075B641 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8-1A0A075B641 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.54■□□□□ 0.24
Trav8-1A0A075B641 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8-1A0A075B641 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav8-1A0A075B641 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trav8-1A0A075B641 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8-1A0A075B641 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav8-1A0A075B641 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav8-1A0A075B641 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8-1A0A075B641 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8-1A0A075B641 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav8-1A0A075B641 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav8-1A0A075B641 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8-1A0A075B641 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8-1A0A075B641 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav8-1A0A075B641 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8-1A0A075B641 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Trav8-1A0A075B641 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav8-1A0A075B641 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8-1A0A075B641 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8-1A0A075B641 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8-1A0A075B641 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav8-1A0A075B641 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8-1A0A075B641 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8-1A0A075B641 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav8-1A0A075B641 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav8-1A0A075B641 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8-1A0A075B641 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav8-1A0A075B641 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8-1A0A075B641 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8-1A0A075B641 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav8-1A0A075B641 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8-1A0A075B641 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8-1A0A075B641 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8-1A0A075B641 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8-1A0A075B641 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8-1A0A075B641 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav8-1A0A075B641 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav8-1A0A075B641 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav8-1A0A075B641 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav8-1A0A075B641 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.45■□□□□ 0.22
Trav8-1A0A075B641 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8-1A0A075B641 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8-1A0A075B641 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8-1A0A075B641 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8-1A0A075B641 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8-1A0A075B641 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav8-1A0A075B641 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8-1A0A075B641 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8-1A0A075B641 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8-1A0A075B641 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8-1A0A075B641 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8-1A0A075B641 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8-1A0A075B641 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav8-1A0A075B641 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8-1A0A075B641 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms