Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-4A0A075B631 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav9n-4A0A075B631 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-4A0A075B631 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-4A0A075B631 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-4A0A075B631 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav9n-4A0A075B631 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-4A0A075B631 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9n-4A0A075B631 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9n-4A0A075B631 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9n-4A0A075B631 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav9n-4A0A075B631 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9n-4A0A075B631 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9n-4A0A075B631 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Trav9n-4A0A075B631 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav9n-4A0A075B631 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9n-4A0A075B631 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9n-4A0A075B631 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-4A0A075B631 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trav9n-4A0A075B631 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-4A0A075B631 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-4A0A075B631 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9n-4A0A075B631 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-4A0A075B631 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-4A0A075B631 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-4A0A075B631 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-4A0A075B631 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9n-4A0A075B631 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-4A0A075B631 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-4A0A075B631 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9n-4A0A075B631 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav9n-4A0A075B631 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-4A0A075B631 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-4A0A075B631 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-4A0A075B631 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav9n-4A0A075B631 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-4A0A075B631 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9n-4A0A075B631 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.72■□□□□ 0.11
Trav9n-4A0A075B631 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.72■□□□□ 0.11
Trav9n-4A0A075B631 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9n-4A0A075B631 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9n-4A0A075B631 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav9n-4A0A075B631 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9n-4A0A075B631 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-4A0A075B631 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-4A0A075B631 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9n-4A0A075B631 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Trav9n-4A0A075B631 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9n-4A0A075B631 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav9n-4A0A075B631 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-4A0A075B631 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-4A0A075B631 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-4A0A075B631 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-4A0A075B631 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9n-4A0A075B631 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav9n-4A0A075B631 Particl-201ENSMUST00000205370 1560 ntBASIC15.66■□□□□ 0.1
Trav9n-4A0A075B631 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-4A0A075B631 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-4A0A075B631 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Trav9n-4A0A075B631 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-4A0A075B631 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9n-4A0A075B631 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav9n-4A0A075B631 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-4A0A075B631 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-4A0A075B631 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav9n-4A0A075B631 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-4A0A075B631 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-4A0A075B631 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9n-4A0A075B631 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav9n-4A0A075B631 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9n-4A0A075B631 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-4A0A075B631 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9n-4A0A075B631 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms