Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4d-3A0A075B625 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav4d-3A0A075B625 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav4d-3A0A075B625 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4d-3A0A075B625 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4d-3A0A075B625 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4d-3A0A075B625 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4d-3A0A075B625 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4d-3A0A075B625 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4d-3A0A075B625 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4d-3A0A075B625 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4d-3A0A075B625 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4d-3A0A075B625 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Trav4d-3A0A075B625 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4d-3A0A075B625 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4d-3A0A075B625 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.77■□□□□ 0.12
Trav4d-3A0A075B625 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav4d-3A0A075B625 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Trav4d-3A0A075B625 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4d-3A0A075B625 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4d-3A0A075B625 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4d-3A0A075B625 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4d-3A0A075B625 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4d-3A0A075B625 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4d-3A0A075B625 Gm25262-201ENSMUST00000174934 133 ntBASIC15.75■□□□□ 0.11
Trav4d-3A0A075B625 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4d-3A0A075B625 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4d-3A0A075B625 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4d-3A0A075B625 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav4d-3A0A075B625 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4d-3A0A075B625 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav4d-3A0A075B625 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4d-3A0A075B625 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trav4d-3A0A075B625 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav4d-3A0A075B625 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4d-3A0A075B625 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4d-3A0A075B625 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4d-3A0A075B625 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4d-3A0A075B625 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav4d-3A0A075B625 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav4d-3A0A075B625 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4d-3A0A075B625 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4d-3A0A075B625 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav4d-3A0A075B625 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4d-3A0A075B625 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4d-3A0A075B625 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4d-3A0A075B625 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4d-3A0A075B625 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4d-3A0A075B625 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4d-3A0A075B625 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4d-3A0A075B625 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav4d-3A0A075B625 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4d-3A0A075B625 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4d-3A0A075B625 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4d-3A0A075B625 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4d-3A0A075B625 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms