Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AC136624.4-201ENST00000573044 370 ntBASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 AC091925.2-201ENST00000625059 256 ntBASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 AC139713.2-214ENST00000642059 1811 ntBASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 AC103710.2-202ENST00000641454 2853 ntBASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNX11Q9Y5W9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AL157777.2-201ENST00000258070 137 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SNORA20.1-201ENST00000364790 130 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SNORD14.1-201ENST00000365609 90 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RNU6-434P-201ENST00000384376 107 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 Y_RNA.483-201ENST00000384380 101 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RNU11-4P-201ENST00000391149 133 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AL357515.1-201ENST00000402967 542 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RPL21P24-201ENST00000413752 448 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RPL23AP1-201ENST00000428990 471 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AC016831.4-201ENST00000438302 307 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AC099799.1-201ENST00000439809 192 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RN7SL432P-201ENST00000484057 298 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SCARNA22-201ENST00000503991 125 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 MTND1P19-201ENST00000511780 315 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RNU6-27P-201ENST00000516146 107 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RNU6-307P-201ENST00000516743 106 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AL137100.2-201ENST00000555786 315 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 MIR3936-201ENST00000584304 110 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AL355810.1-201ENST00000614629 552 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AC103858.2-201ENST00000621471 543 ntBASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SNX11Q9Y5W9 AL445437.1-201ENST00000623157 3087 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 RNU6-842P-201ENST00000384269 107 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 Y_RNA.515-201ENST00000384535 112 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AC007738.1-201ENST00000413892 348 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 PSMA2P3-201ENST00000429685 675 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 RPL35AP22-201ENST00000436855 335 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AL691482.1-201ENST00000453255 87 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 RPL10P17-201ENST00000453852 316 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AC133473.1-201ENST00000455173 299 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 RPS23P3-201ENST00000470993 430 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 GZMAP1-201ENST00000503054 631 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 FTH1P24-201ENST00000503502 462 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AC133555.2-201ENST00000550213 292 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AC005899.2-201ENST00000584353 90 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 AC022726.1-201ENST00000587475 207 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 NF1P5-201ENST00000588287 448 ntBASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX11Q9Y5W9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms