Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC010186.2-204ENST00000537668 439 ntBASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AC007458.1-201ENST00000542812 373 ntBASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AC051619.2-201ENST00000559063 397 ntBASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AC004832.4-201ENST00000608952 331 ntBASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 SRRM1P3-201ENST00000426911 2678 ntBASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
HRH3Q9Y5N1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SNORD113-8-201ENST00000363497 74 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SNORD50B-201ENST00000364995 70 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SNORA12.2-201ENST00000391040 156 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AL513331.1-201ENST00000411908 397 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SNORD56-201ENST00000413522 71 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 RPL23AP22-201ENST00000437556 453 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 RPL12P39-201ENST00000455456 496 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC087588.1-201ENST00000462203 316 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 RN7SL799P-201ENST00000475891 298 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 RPS29P26-201ENST00000477483 171 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC004024.1-201ENST00000549244 247 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC104581.2-201ENST00000572227 430 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SNORD84-203ENST00000584275 78 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC037487.3-201ENST00000606668 112 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 CU639417.4-201ENST00000623928 207 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AL691477.1-201ENST00000624398 162 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC004076.2-201ENST00000620532 3323 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 AC093591.2-201ENST00000565254 3843 ntBASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HRH3Q9Y5N1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 NCAPGP1-201ENST00000505112 1814 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AC007785.2-201ENST00000598627 1916 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 HAUS6P2-201ENST00000433254 2404 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 GVINP1-202ENST00000531871 7271 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 MIR412-201ENST00000362142 91 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 RNA5SP91-201ENST00000390902 119 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 SNORA53-201ENST00000391141 249 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AC093414.1-201ENST00000434712 514 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 EIF4A1P11-201ENST00000451239 222 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 RPL37P6-202ENST00000464216 403 ntBASIC5.23□□□□□ -1.57
HRH3Q9Y5N1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms