Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 OR6C71P-202ENST00000641886 1107 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AL391417.1-201ENST00000404100 426 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC017079.2-201ENST00000416102 485 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC018630.2-202ENST00000422992 927 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 PPP1R11P2-201ENST00000423543 382 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 MTND1P20-201ENST00000430341 950 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AL353705.1-201ENST00000433468 480 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 LSM1P1-201ENST00000438629 273 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 MTND2P24-201ENST00000453434 806 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 PCBP2P3-201ENST00000509726 843 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC109464.2-201ENST00000510242 943 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-1129P-201ENST00000515964 104 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC008489.1-201ENST00000524271 483 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AP002404.1-201ENST00000532005 451 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC018714.1-201ENST00000605028 208 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC004832.5-201ENST00000608677 401 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC004067.1-201ENST00000608733 700 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC072039.2-201ENST00000608883 439 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC008443.7-201ENST00000622195 246 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AC026422.1-201ENST00000623961 452 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 DDX10P1-201ENST00000448545 1933 ntBASIC3.23□□□□□ -1.89
PCDHGA1Q9Y5H4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL672167.1-206ENST00000356293 943 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-799P-201ENST00000363567 107 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 RNA5SP42-201ENST00000364278 115 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 RNA5SP139-201ENST00000364340 117 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-253P-201ENST00000384730 105 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-754P-201ENST00000391166 107 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL590084.2-201ENST00000401481 382 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC007899.1-201ENST00000412776 775 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC005005.2-201ENST00000420779 380 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC107083.1-201ENST00000439643 279 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC00888-204ENST00000487386 421 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC080014.1-201ENST00000496877 1201 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AP003497.1-201ENST00000528472 562 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC087276.1-201ENST00000529659 480 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC034105.3-201ENST00000565294 442 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AP000811.1-201ENST00000603803 651 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AL031667.3-201ENST00000620124 655 ntBASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA1Q9Y5H4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGA1Q9Y5H4 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.9
PCDHGA1Q9Y5H4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGA1Q9Y5H4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGA1Q9Y5H4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms