Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 RPS3AP17-201ENST00000472594 777 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 AC112204.1-201ENST00000502591 103 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 AC018630.1-201ENST00000541376 925 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 MIR3124-201ENST00000582636 67 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 BNIP3P8-201ENST00000597863 560 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 AC091304.9-201ENST00000612091 226 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 AC108479.2-201ENST00000617314 601 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 AC072046.2-201ENST00000618366 268 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 AC002550.2-201ENST00000621246 394 ntBASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.24□□□□□ -1.73
SCAF8Q9UPN6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 CCT4P2-201ENST00000233836 1548 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 FRG1CP-201ENST00000358464 769 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 RNU6-263P-201ENST00000363811 107 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 RNU6-853P-201ENST00000364306 107 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 Y_RNA.303-201ENST00000364998 94 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 SNORD115-47-201ENST00000391226 86 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 U3.26-201ENST00000391236 204 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL445669.1-201ENST00000426743 755 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 GDI2P2-201ENST00000445131 608 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 Z75741.1-201ENST00000446793 314 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 snoU109.1-201ENST00000459339 135 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 RPL31P58-201ENST00000469001 379 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 NIPA2P2-201ENST00000496376 1083 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC103783.1-201ENST00000520506 373 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 MTND4LP18-201ENST00000526864 291 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 SNORD84-203ENST00000584275 78 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL359999.1-201ENST00000604513 294 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL031176.1-201ENST00000604554 466 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC091965.4-201ENST00000607691 587 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC004067.1-201ENST00000608733 700 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC135507.2-201ENST00000612443 309 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL713922.2-201ENST00000619384 716 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AC005609.4-201ENST00000625071 447 ntBASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCAF8Q9UPN6 AL645937.1-201ENST00000641739 1652 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 RNU4-12P-201ENST00000365233 139 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 U3.20-201ENST00000390909 217 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 MTCO2P19-201ENST00000427513 598 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC087650.1-201ENST00000431445 468 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AL121601.2-201ENST00000438019 707 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AL121871.1-201ENST00000443413 436 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC112653.1-201ENST00000443851 386 ntBASIC4.22□□□□□ -1.73
SCAF8Q9UPN6 AC010655.1-201ENST00000449336 292 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms