Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 RNU6-985P-201ENST00000410182 104 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 Y_RNA.646-201ENST00000410980 101 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 PDSS1P1-201ENST00000422953 1114 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC018865.2-201ENST00000423631 129 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 RPL12P34-201ENST00000424532 479 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 SNAP23P1-201ENST00000433229 246 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 GAPDHP27-201ENST00000447427 1020 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 DYNLL1P5-201ENST00000467158 270 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 RPL21P126-201ENST00000470049 478 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 RN7SKP82-201ENST00000516786 223 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC090115.3-201ENST00000553218 849 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 MIR4680-201ENST00000580906 66 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AL031176.1-201ENST00000604554 466 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC083806.3-201ENST00000614016 455 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AL355365.1-201ENST00000616480 294 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 AL669831.3-213ENST00000636676 183 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 SAGE2P-201ENST00000420011 2126 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 A2MP1-204ENST00000566278 4130 ntBASIC5.12□□□□□ -1.59
PCDHA4Q9UN74 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AC139713.2-215ENST00000641428 5037 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AL137003.2-201ENST00000606924 2538 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 Y_RNA.158-201ENST00000363651 101 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 Y_RNA.401-201ENST00000383965 117 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 RNU6-146P-201ENST00000384602 108 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 RNU6-907P-201ENST00000390924 102 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MIR548F4-201ENST00000408515 105 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 CYCSP10-201ENST00000417973 294 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AC245028.1-201ENST00000423259 256 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MTCYBP9-201ENST00000431021 303 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 RN7SL738P-201ENST00000470264 297 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 RNA5SP497-201ENST00000516081 97 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 RNU6-1213P-201ENST00000517075 94 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AL390726.5-202ENST00000564800 256 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AC106782.4-201ENST00000568264 210 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MIR4700-201ENST00000578311 74 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MIR4715-201ENST00000584117 79 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MIR3149-201ENST00000584629 83 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 VN1R107P-201ENST00000601784 209 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 7SK.7-201ENST00000603504 247 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AC124312.5-201ENST00000604451 268 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AC009570.1-201ENST00000609599 745 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 TUG1_2.1-201ENST00000614234 87 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 FAM157A-202ENST00000615155 405 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 MAPK10-320ENST00000641462 6696 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AL049641.1-201ENST00000441055 1948 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 AC027228.2-201ENST00000567141 2154 ntBASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHA4Q9UN74 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 PCAT14-202ENST00000627127 3935 ntBASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHA4Q9UN74 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms