Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AC087650.1-201ENST00000431445 468 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AC073063.1-201ENST00000434352 607 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AL031663.1-201ENST00000437445 219 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 RPL7P54-201ENST00000438336 674 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 RBMY2UP-201ENST00000453474 324 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 RPL21P8-201ENST00000465083 535 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 KLHL2P1-201ENST00000508691 521 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AC023050.3-201ENST00000541142 333 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 RPL21P5-201ENST00000554662 472 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AL391646.1-201ENST00000603860 190 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AC068722.2-201ENST00000618734 544 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 SAMMSON-213ENST00000641336 1521 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.87□□□□□ -1.47
COL17A1Q9UMD9 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 RNA5SP50-201ENST00000363731 107 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 RNU4-20P-201ENST00000365601 151 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 RNU6-74P-201ENST00000384235 107 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 RNU6-809P-201ENST00000384461 107 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 RNU6-1151P-201ENST00000384684 107 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 PIGFP2-201ENST00000421400 651 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AC007182.2-201ENST00000489251 402 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AC021146.3-201ENST00000511911 260 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 RNU6-150P-201ENST00000516237 95 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 IGKV2-36-201ENST00000519999 223 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AP003467.2-201ENST00000520175 319 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 COPS8P3-201ENST00000526024 482 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AC087241.2-201ENST00000535801 324 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 TPMTP1-201ENST00000592307 737 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 PISRT1-201ENST00000626175 531 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 AL121839.2-201ENST00000565058 6943 ntBASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL17A1Q9UMD9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 AL512646.1-201ENST00000269395 1077 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 RNY4P34-201ENST00000364779 95 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 Y_RNA.481-201ENST00000384373 102 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 RNU6-729P-201ENST00000384399 107 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 Y_RNA.552-201ENST00000384665 112 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 MIR1305-201ENST00000408300 86 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 MRPL50P2-201ENST00000416821 482 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 MTND6P13-201ENST00000443510 523 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 RNU6-559P-201ENST00000516151 98 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 BTF3P12-201ENST00000519620 469 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 AC006077.1-201ENST00000604746 343 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 AC064801.1-201ENST00000612025 407 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 AL355810.1-201ENST00000614629 552 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 MFSD8-236ENST00000641509 4050 ntBASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL17A1Q9UMD9 RNA5SP374-201ENST00000362939 125 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 RN7SKP44-201ENST00000363602 316 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 SNORA80A-201ENST00000363922 136 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 RNU6-510P-201ENST00000391239 108 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 Y_RNA.608-201ENST00000410647 95 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 SPA17P1-201ENST00000416656 452 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 AC233981.1-201ENST00000423224 461 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 DYNLL1P7-201ENST00000429273 258 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 ATP5JP1-201ENST00000431631 322 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 AL160004.2-201ENST00000432935 350 ntBASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.84□□□□□ -1.47
COL17A1Q9UMD9 IFNA20P-201ENST00000436840 528 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms