Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP25Q9UHP3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP25Q9UHP3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP25Q9UHP3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP25Q9UHP3 RNU6-1085P-201ENST00000363576 107 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 RNU6-173P-201ENST00000364215 104 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 MT-TL1-201ENST00000386347 75 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 MTCO1P20-201ENST00000425366 358 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 RPL31P35-201ENST00000431058 377 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 OR4K11P-201ENST00000431829 904 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC007182.2-201ENST00000489251 402 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AP003181.2-201ENST00000528941 181 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 CYCSP29-201ENST00000533731 318 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 BNIP3P5-201ENST00000562290 498 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 MIR3690-201ENST00000580266 75 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 RN7SL600P-201ENST00000581811 299 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 AP001429.1-201ENST00000602568 530 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 BRDTP1-201ENST00000605735 677 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 MIR6868-201ENST00000611215 58 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP25Q9UHP3 MIR6130-201ENST00000619419 109 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 AL732618.1-201ENST00000623251 301 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP25Q9UHP3 MTND5P33-201ENST00000571250 1450 ntBASIC4.47□□□□□ -1.69
USP25Q9UHP3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP25Q9UHP3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
USP25Q9UHP3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP25Q9UHP3 CASC19-280ENST00000642102 1351 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 Y_RNA.38-201ENST00000362617 102 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 Y_RNA.295-201ENST00000364918 102 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC068538.1-201ENST00000376856 336 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP25Q9UHP3 RPL23AP32-201ENST00000395315 459 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 HLFP1-201ENST00000402375 499 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 SNORA11-201ENST00000408789 128 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC009237.5-201ENST00000414271 501 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 SSXP9-201ENST00000417503 292 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 USP9YP27-201ENST00000418455 438 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 FCF1P1-201ENST00000432690 571 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC004866.2-201ENST00000438285 481 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 RAC1P7-201ENST00000445367 377 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 HMGN2P7-201ENST00000456186 273 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 VN1R17P-201ENST00000472048 1090 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC092451.1-201ENST00000480211 153 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC025678.1-201ENST00000567861 338 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 FGF7P1-201ENST00000582820 288 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC005730.3-201ENST00000583067 366 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 UBE2L4-201ENST00000587688 464 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 BX664608.1-201ENST00000610519 487 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AL020991.1-201ENST00000612314 373 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AL355810.1-201ENST00000614629 552 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP25Q9UHP3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC009159.1-201ENST00000618386 642 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP25Q9UHP3 AL445567.2-201ENST00000618935 498 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AL158801.5-201ENST00000623123 465 ntBASIC4.46□□□□□ -1.7
USP25Q9UHP3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP25Q9UHP3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP25Q9UHP3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.46□□□□□ -1.7
USP25Q9UHP3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms