Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 BPTFP1-201ENST00000579209 492 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 MIR3616-201ENST00000584070 92 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AC015688.2-201ENST00000584523 262 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AL355802.4-201ENST00000607635 548 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AC103710.4-201ENST00000609301 899 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 AP003399.1-201ENST00000637534 361 ntBASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS29Q9UBQ0 MTND4P35-201ENST00000604257 1375 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AL513331.1-201ENST00000411908 397 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC092170.1-201ENST00000440211 356 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 PGBD4P3-201ENST00000440731 581 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 CABYRP1-201ENST00000465493 1045 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC109464.2-201ENST00000510242 943 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC023824.2-201ENST00000566185 400 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC009127.3-201ENST00000570531 403 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 RPS15AP11-201ENST00000594193 385 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 OR10AB1P-201ENST00000609613 938 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AL450472.3-201ENST00000615578 367 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC090772.4-201ENST00000623599 362 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC010872.1-201ENST00000624225 675 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 MIR7515-201ENST00000637837 67 ntBASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
VPS29Q9UBQ0 GDI2P1-201ENST00000429312 1336 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 SNORA38-201ENST00000363946 132 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 SNORA6-201ENST00000384033 151 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 UBE2V1P2-201ENST00000397758 440 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 RNU2-15P-201ENST00000410692 191 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 RPL31P54-201ENST00000429803 370 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AL031659.1-201ENST00000447075 539 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 RFC5P1-201ENST00000454419 874 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AC107626.1-201ENST00000471084 183 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AC128713.1-201ENST00000471495 306 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AC011352.3-201ENST00000505162 593 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 NDUFS5P6-201ENST00000529136 295 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 AC022336.2-201ENST00000568966 2538 ntBASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS29Q9UBQ0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS29Q9UBQ0 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 ANKRD36P1-201ENST00000344424 659 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 RNU4-82P-201ENST00000362443 140 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 RN7SKP226-201ENST00000364912 300 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 XGY1-201ENST00000381172 446 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 NPM1P10-201ENST00000398310 865 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 MTND1P23-201ENST00000416931 372 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC099548.1-201ENST00000421443 426 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 WARS2P1-201ENST00000429678 537 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AL512844.2-201ENST00000433990 593 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 TAAR7P-201ENST00000436141 242 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC009237.8-201ENST00000445492 379 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 NDUFA5P7-201ENST00000452914 242 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 MTND2P6-201ENST00000455337 1030 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC008427.1-201ENST00000503102 655 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC027309.2-201ENST00000520566 192 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 ARL2BPP5-201ENST00000523141 481 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 AP002770.2-201ENST00000543613 532 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms