Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC092747.3-201ENST00000603769 301 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC026951.1-201ENST00000559530 2459 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 MAPK10-320ENST00000641462 6696 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC090229.1-201ENST00000590983 1609 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 Y_RNA.259-201ENST00000364619 101 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 Y_RNA.326-201ENST00000365176 113 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 MIR195-201ENST00000385194 87 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 RPEP3-201ENST00000425462 676 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC012671.1-201ENST00000451912 203 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC116533.1-201ENST00000459748 321 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC106872.2-201ENST00000494303 480 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 CEACAMP10-202ENST00000495431 496 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC108145.1-201ENST00000503770 153 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 RNU6-123P-201ENST00000516163 102 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 Y_RNA.682-201ENST00000516457 100 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 FRG2DP-202ENST00000566967 323 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 MIR4715-201ENST00000584117 79 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AL158032.1-201ENST00000605401 106 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 Z82243.1-201ENST00000609432 473 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AL133215.3-201ENST00000609801 448 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 DUSP12P1-201ENST00000612874 516 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC012409.4-201ENST00000612923 249 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 MIR6715B-201ENST00000637172 77 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 EOGT-210ENST00000615922 1931 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC074029.4-201ENST00000624796 1859 ntBASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KCMF1Q9P0J7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 RNU6-692P-201ENST00000384496 107 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 POLHP1-201ENST00000411806 470 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 VDAC1P9-201ENST00000412766 841 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 PPP1R11P2-201ENST00000423543 382 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 RPS12P10-201ENST00000427031 377 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 CALM2P2-201ENST00000428512 440 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 MTCYBP6-201ENST00000441810 138 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AL121871.1-201ENST00000443413 436 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 SCARNA18-201ENST00000459004 134 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 MTCO1P29-201ENST00000496868 288 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 RN7SKP13-201ENST00000515933 244 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 RNU6-559P-201ENST00000516151 98 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 RNU6-685P-201ENST00000517088 95 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC008489.1-201ENST00000524271 483 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AL121576.1-201ENST00000556055 276 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 POLR3GP2-201ENST00000588366 668 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 AC020910.2-201ENST00000603635 610 ntBASIC4.25□□□□□ -1.73
KCMF1Q9P0J7 MIR378J-201ENST00000611988 109 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms