Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 RNA5SP36-201ENST00000410197 133 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC092447.6-201ENST00000414578 210 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 PDCL2P1-201ENST00000419302 352 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 OR1AA1P-201ENST00000419597 916 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 RPL23AP46-201ENST00000438548 490 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 H2AFZP6-201ENST00000444403 394 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 CBWD4P-201ENST00000445695 655 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AL356010.1-201ENST00000456364 102 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 HMGB1P25-201ENST00000468402 607 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC008958.1-201ENST00000511047 682 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 RNA5SP49-201ENST00000516450 115 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 RN7SKP234-201ENST00000517173 224 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC128657.1-201ENST00000549459 145 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 TVP23BP1-201ENST00000557500 617 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AL133153.1-201ENST00000557756 303 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AL360157.1-201ENST00000565962 87 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC244505.7-201ENST00000599675 272 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC103710.3-201ENST00000608157 948 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC064801.1-201ENST00000612025 407 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC007742.2-201ENST00000618226 398 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 AC005858.4-201ENST00000623191 700 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 PABPC1P7-201ENST00000413177 1513 ntBASIC3.98□□□□□ -1.77
EHD3Q9NZN3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EHD3Q9NZN3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNU6-511P-201ENST00000363496 107 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNU4-76P-201ENST00000364509 141 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 SNORD81.2-201ENST00000365153 76 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNU6-278P-201ENST00000390945 109 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNU6-332P-201ENST00000391193 108 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RPL32P23-201ENST00000397237 405 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNU6-373P-201ENST00000411247 98 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AL159169.1-201ENST00000421119 127 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 MTATP6P16-201ENST00000434543 526 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 DDX3P2-201ENST00000446138 111 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RPL36AP13-201ENST00000457490 317 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 HMGB3P30-201ENST00000457863 606 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNA5SP246-201ENST00000458909 119 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNU7-59P-201ENST00000459101 61 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RN7SL303P-201ENST00000469773 251 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC109327.1-201ENST00000471666 403 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AL163973.1-201ENST00000484753 577 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 TMEM248P1-201ENST00000510579 951 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNA5SP519-201ENST00000516480 119 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 SNORD60.2-201ENST00000516883 86 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC011979.2-201ENST00000527568 352 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC243972.3-201ENST00000539655 198 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC023050.3-201ENST00000541142 333 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 MIR4284-201ENST00000578924 81 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC023575.1-201ENST00000580510 358 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AP001429.1-201ENST00000602568 530 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC020910.2-201ENST00000603635 610 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC114781.5-201ENST00000615297 108 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 AC006026.1-201ENST00000444025 1803 ntBASIC3.97□□□□□ -1.77
EHD3Q9NZN3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
EHD3Q9NZN3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
EHD3Q9NZN3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.96□□□□□ -1.77
EHD3Q9NZN3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
EHD3Q9NZN3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.96□□□□□ -1.78
EHD3Q9NZN3 RNU1-132P-201ENST00000364300 164 ntBASIC3.96□□□□□ -1.78
EHD3Q9NZN3 RNU4-48P-201ENST00000365559 182 ntBASIC3.96□□□□□ -1.78
EHD3Q9NZN3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms