Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 BX890604.2-201ENST00000427883 474 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 MTND2P4-201ENST00000445034 1004 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AP000542.1-201ENST00000448473 371 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC109486.1-201ENST00000486833 374 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC097462.2-201ENST00000504623 481 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC006390.1-201ENST00000508068 283 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC013828.2-201ENST00000532487 235 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 OR4T1P-201ENST00000554933 911 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 MIR544B-201ENST00000582372 78 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC006504.3-201ENST00000586818 523 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC008507.1-201ENST00000587506 734 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC010620.1-201ENST00000601088 1102 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC093783.1-201ENST00000612976 329 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AL360181.4-201ENST00000621752 134 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC091931.1-201ENST00000623488 728 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC006386.2-201ENST00000624491 75 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC012005.1-201ENST00000624575 75 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AL049780.3-201ENST00000624612 1583 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 AC004972.1-201ENST00000623934 2209 ntBASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NLGN3Q9NZ94 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 RNU6-769P-201ENST00000384407 104 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 Y_RNA.510-201ENST00000384511 114 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 RNU2-47P-201ENST00000410649 186 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 RPL7P8-201ENST00000411964 730 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 RPS15AP38-201ENST00000413110 372 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 HMGB1P11-201ENST00000413899 637 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 NPM1P11-201ENST00000417106 855 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC099677.1-201ENST00000420575 175 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 RPL23AP69-201ENST00000431134 458 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC140076.1-201ENST00000449897 361 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 SSXP4-201ENST00000451349 245 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 ELOCP23-201ENST00000452014 332 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 KATNBL1P6-201ENST00000453433 915 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 FAM172BP-201ENST00000487497 1089 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 MLLT10P2-201ENST00000506434 249 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 RNU6-714P-201ENST00000516963 103 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC106038.2-201ENST00000520706 568 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AP004247.1-201ENST00000531556 1289 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC022080.3-201ENST00000544433 482 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 SETP7-201ENST00000552169 453 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 BNIP3P23-201ENST00000599655 511 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AP000403.1-201ENST00000603349 851 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 DUXAP11-201ENST00000603858 526 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AL022161.1-201ENST00000604390 213 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AC006927.3-201ENST00000638789 384 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AL136164.4-201ENST00000625013 2135 ntBASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.14□□□□□ -1.91
NLGN3Q9NZ94 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 PABPC1P9-201ENST00000426076 1612 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 RNU4-40P-201ENST00000364351 143 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 RNU6-7-201ENST00000364784 107 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 RNU6-8-201ENST00000365467 107 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 SNORA7.4-201ENST00000384249 137 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 SNORD116-1-201ENST00000384335 95 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 AC245291.1-201ENST00000419501 328 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 DUTP6-201ENST00000425573 462 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 AC236972.1-201ENST00000433225 199 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 RABEPKP1-201ENST00000440529 1026 ntBASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.13□□□□□ -1.91
NLGN3Q9NZ94 PAXBP1P1-201ENST00000449315 447 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms