Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PRO1804-201ENST00000623780 2050 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 MAPK10-253ENST00000641010 4072 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 RNU6-817P-201ENST00000391083 104 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC009161.1-201ENST00000417306 376 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 BX510359.2-201ENST00000417920 305 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC068533.1-201ENST00000418542 415 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC018630.2-202ENST00000422992 927 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 ZNF863P-201ENST00000426746 417 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC005154.2-201ENST00000438110 379 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AL451050.1-201ENST00000450126 415 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 FABP5P13-201ENST00000452144 328 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 SNRPFP3-201ENST00000457792 225 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AP000852.1-201ENST00000472460 573 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 RPL39P36-201ENST00000490784 156 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 MTCO2P30-201ENST00000503662 364 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC104806.1-201ENST00000508720 308 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC114786.4-201ENST00000508771 728 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC093840.1-201ENST00000511599 336 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC046134.1-201ENST00000514454 666 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 LRRC34P2-201ENST00000514850 553 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AL138976.2-201ENST00000563989 694 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 MIR3921-201ENST00000577308 85 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 RN7SL690P-201ENST00000582087 240 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 UBE2V2P2-201ENST00000587677 504 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 BPIFA4P-203ENST00000603168 689 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC104763.2-201ENST00000604179 382 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC007619.2-201ENST00000605743 379 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC012409.3-201ENST00000611343 981 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AL365204.3-201ENST00000612448 685 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 AC012409.4-201ENST00000612923 249 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 MTND4P12-201ENST00000498999 1377 ntBASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCM2LQ9NUG4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AL590240.1-201ENST00000334118 313 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 Y_RNA.231-201ENST00000364358 102 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 SNORA51.2-201ENST00000364595 132 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 RNA5SP189-201ENST00000364920 115 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 RNA5SP167-201ENST00000365461 116 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 MIR1290-201ENST00000408735 78 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 RNU4-25P-201ENST00000410569 230 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 RSU1P3-201ENST00000412878 835 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 RPL23AP1-201ENST00000428990 471 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 HMGB1P27-201ENST00000431429 603 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 USP9YP8-201ENST00000441913 500 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 CBWD4P-201ENST00000445695 655 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AL671855.1-201ENST00000446875 1203 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 RNU6-953P-201ENST00000459154 107 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AC008628.2-201ENST00000502605 298 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AC098591.2-201ENST00000510152 315 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AC005921.1-201ENST00000510589 286 ntBASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.23□□□□□ -1.73
CCM2LQ9NUG4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms