Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AL031667.3-201ENST00000620124 655 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AC131159.1-201ENST00000621854 213 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 RNA5SP374-201ENST00000362939 125 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 Y_RNA.302-201ENST00000364997 102 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 SNORA54-201ENST00000384281 123 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC092754.2-201ENST00000463506 460 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 RPL7P5-201ENST00000471472 736 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 RN7SL20P-201ENST00000488827 297 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC109464.2-201ENST00000510242 943 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 LTV1P1-201ENST00000510683 1237 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC068657.1-201ENST00000520807 306 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC055876.1-202ENST00000567053 138 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC034268.2-201ENST00000571784 482 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 MIR4474-201ENST00000579189 78 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 COX6CP3-201ENST00000580869 223 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 AC022079.1-201ENST00000621546 602 ntBASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SMC4Q9NTJ3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC073325.2-201ENST00000339545 159 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL590084.2-201ENST00000401481 382 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC245054.2-201ENST00000415639 319 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 OR4K11P-201ENST00000431829 904 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 UBE2D3P1-201ENST00000436669 444 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 MTND5P2-201ENST00000442927 1142 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 OR6C5P-201ENST00000452388 923 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 ART2BP-201ENST00000453501 499 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 ATG12P2-201ENST00000456830 416 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 DSTNP2-201ENST00000504533 515 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC010486.2-201ENST00000505572 483 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL359273.1-201ENST00000510918 627 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 SNORA31.22-201ENST00000517204 135 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 ERHP1-201ENST00000523006 310 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AP001804.3-201ENST00000525146 880 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 NIFKP6-201ENST00000598115 845 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL109653.1-201ENST00000603091 248 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC106791.2-201ENST00000604680 391 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC018638.7-201ENST00000605836 1114 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AC091953.5-201ENST00000622919 233 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 AL159972.1-201ENST00000625150 448 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 MIR622-201ENST00000638396 96 ntBASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMC4Q9NTJ3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 MIR148B-201ENST00000362252 99 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 RNU6-853P-201ENST00000364306 107 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 RNU6-637P-201ENST00000384050 107 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 SNORA9-201ENST00000384215 133 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 RNU6-114P-201ENST00000384704 105 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 SNORA46-201ENST00000384762 135 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 RPL7P25-201ENST00000404151 721 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC233728.2-201ENST00000425348 757 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 MTND1P20-201ENST00000430341 950 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 SNRPEP4-201ENST00000435815 279 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 HMGN2P20-201ENST00000437531 273 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AL592447.1-201ENST00000447592 540 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 RPS3AP43-201ENST00000479743 781 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 LINC00888-204ENST00000487386 421 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms