Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC139495.1-202ENST00000513164 354 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 RNU6-273P-201ENST00000516937 96 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC104986.1-201ENST00000517978 436 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 IFITM8P-201ENST00000522529 394 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC005357.1-201ENST00000588399 301 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AL670379.11-201ENST00000604059 253 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AL670379.10-201ENST00000604330 253 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AL670379.12-201ENST00000605291 253 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AL670379.9-201ENST00000605428 253 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC091905.2-201ENST00000623143 306 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 CR381572.1-201ENST00000625098 102 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 U2.22-201ENST00000636441 106 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 ZNF807-201ENST00000328088 1707 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC093535.2-201ENST00000624769 2326 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC000123.3-201ENST00000624029 4975 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 Y_RNA.135-201ENST00000363439 95 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 Y_RNA.257-201ENST00000364596 102 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 SNORA70.4-201ENST00000365509 134 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 RNU11-4P-201ENST00000391149 133 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 PTMAP2-201ENST00000397627 327 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 RN7SKP158-201ENST00000410453 326 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 PRELID3BP11-201ENST00000414230 479 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC008267.5-201ENST00000424928 265 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 PRPS1P1-201ENST00000445305 876 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 DDX3P2-201ENST00000446138 111 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 RPL30P15-201ENST00000457129 321 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC108751.2-201ENST00000469993 231 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 TRBV1-201ENST00000476502 284 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 HSPD1P15-201ENST00000505573 1122 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 RNA5SP337-201ENST00000517007 109 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC009902.1-201ENST00000519351 183 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AP002404.1-201ENST00000532005 451 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 LARP7P2-201ENST00000575306 125 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 MIR5186-201ENST00000577504 120 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC099669.2-201ENST00000616549 437 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC007485.1-201ENST00000616755 206 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG3Q9NT62 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ATG3Q9NT62 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG3Q9NT62 AC092125.1-201ENST00000562568 1995 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 MTND5P27-201ENST00000428871 1720 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 LINC01109-201ENST00000603837 3081 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG3Q9NT62 MTND5P10-201ENST00000603719 1809 ntBASIC5.51□□□□□ -1.53
ATG3Q9NT62 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG3Q9NT62 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG3Q9NT62 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG3Q9NT62 MIR208A-201ENST00000362287 71 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 RNY1P12-201ENST00000364251 105 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.5□□□□□ -1.53
ATG3Q9NT62 U3.12-201ENST00000364498 214 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms