Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 GABPAP-201ENST00000419271 1356 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 RNU5E-6P-201ENST00000365574 115 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 RNU6-780P-201ENST00000391030 104 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 RAB9AP3-201ENST00000412737 573 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 PPP1R11P2-201ENST00000423543 382 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 RAB9AP1-201ENST00000449393 573 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC008481.1-201ENST00000463278 396 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 RN7SL271P-201ENST00000487601 295 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 SNORA40.12-201ENST00000516329 111 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC123904.3-201ENST00000547218 814 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC093012.1-202ENST00000549403 582 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC024220.1-201ENST00000603675 484 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 AP001596.2-201ENST00000608410 312 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 MAPK10-372ENST00000641954 3413 ntBASIC4.5□□□□□ -1.69
VTA1Q9NP79 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
VTA1Q9NP79 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTA1Q9NP79 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC011266.1-201ENST00000624119 3569 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTA1Q9NP79 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTA1Q9NP79 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTA1Q9NP79 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTA1Q9NP79 RNU6-173P-201ENST00000364215 104 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RNA5SP97-201ENST00000365006 84 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RNU6-1074P-201ENST00000383995 104 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RNU6-1181P-201ENST00000384191 106 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 AMD1P2-201ENST00000412936 992 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 AL139413.1-201ENST00000421309 217 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RPL23AP30-201ENST00000432419 501 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 NFU1P2-201ENST00000448700 469 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 FDX1P2-201ENST00000450769 375 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 HMGB3P30-201ENST00000457863 606 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RNU7-63P-201ENST00000459054 62 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RN7SL432P-201ENST00000484057 298 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 VN1R104P-201ENST00000505115 1009 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 RNU6-358P-201ENST00000516564 75 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 Y_RNA.704-201ENST00000516851 102 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RNU6-1220P-201ENST00000517126 108 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 SNRPGP15-201ENST00000600149 222 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 XIAPP1-201ENST00000603162 600 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 AC010591.1-201ENST00000603941 649 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 HMGN2P28-201ENST00000606102 262 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 MIR432-201ENST00000606207 94 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 DUXAP9-208ENST00000622815 614 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 AP003122.6-201ENST00000623831 495 ntBASIC4.49□□□□□ -1.69
VTA1Q9NP79 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTA1Q9NP79 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTA1Q9NP79 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTA1Q9NP79 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
VTA1Q9NP79 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 SDAD1P2-201ENST00000441308 2028 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 RNA5SP399-201ENST00000364003 117 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms