Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD248Q9HCU0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.57□□□□□ -1.68
CD248Q9HCU0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD248Q9HCU0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD248Q9HCU0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.57□□□□□ -1.68
CD248Q9HCU0 AL391684.1-202ENST00000641293 1636 ntBASIC4.57□□□□□ -1.68
CD248Q9HCU0 AL049780.3-201ENST00000624612 1583 ntBASIC4.57□□□□□ -1.68
CD248Q9HCU0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC027287.1-201ENST00000553115 1453 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 RPL23AP57-201ENST00000332361 466 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 RNU4-1-201ENST00000363925 141 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 Y_RNA.452-201ENST00000384202 108 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 RNU6-831P-201ENST00000384548 107 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 MIR1-2-201ENST00000384961 85 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 RNY4P36-201ENST00000391116 96 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 Y_RNA.615-201ENST00000410769 117 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC078974.1-201ENST00000411597 223 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 TPMTP2-201ENST00000414372 726 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 USP9YP16-201ENST00000430287 407 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 USP9YP23-201ENST00000455085 407 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 RPS20P32-201ENST00000456044 356 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 AL163973.1-201ENST00000484753 577 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC108145.1-201ENST00000503770 153 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 SOD1P3-201ENST00000518682 454 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC090572.1-201ENST00000519251 160 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 OR5BN1P-201ENST00000532955 829 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 SULT1C2P1-202ENST00000562418 459 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC007224.1-201ENST00000564410 144 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 BBIP1P1-201ENST00000602999 279 ntBASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD248Q9HCU0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.56□□□□□ -1.68
CD248Q9HCU0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 Y_RNA.100-201ENST00000363141 102 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 RNU6-996P-201ENST00000365438 107 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 RNA5SP366-201ENST00000365454 123 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD248Q9HCU0 RNU6-1106P-201ENST00000390845 107 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 SNORD37.1-201ENST00000390968 65 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 CISD1P1-201ENST00000393907 327 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 DHFRP6-201ENST00000401776 268 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 RNU2-21P-201ENST00000410368 188 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 RNA5SP306-201ENST00000411087 107 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AC007283.2-201ENST00000424739 197 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 RPS27AP12-201ENST00000429552 465 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 PSMA2P3-201ENST00000429685 675 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 SNRPEP4-201ENST00000435815 279 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 HMGN2P21-201ENST00000447764 270 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 NUTF2P3-201ENST00000448540 384 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 HMGB3P22-202ENST00000451823 572 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AL356010.1-201ENST00000456364 102 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 RPS15AP1-201ENST00000457423 391 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 Y_RNA.635-201ENST00000459041 101 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AC079804.1-201ENST00000461922 436 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 VN1R17P-201ENST00000472048 1090 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AP001025.2-201ENST00000490908 477 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AC034222.1-201ENST00000494052 532 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 MTCO1P29-201ENST00000496868 288 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 TTC39CP1-201ENST00000512513 755 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 AP003730.1-201ENST00000524605 285 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.55□□□□□ -1.68
CD248Q9HCU0 AC107016.1-201ENST00000550463 337 ntBASIC4.55□□□□□ -1.68
CD248Q9HCU0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms