Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SNORA51-201ENST00000606420 132 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC011816.2-201ENST00000607089 556 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC013476.2-201ENST00000614456 459 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC091834.1-201ENST00000614543 472 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC243312.2-201ENST00000623340 601 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC079597.1-201ENST00000624306 508 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AL359740.1-201ENST00000624340 592 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC007496.3-201ENST00000624987 3443 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 RNU6-114P-201ENST00000384704 105 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 MIR218-2-201ENST00000385006 110 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 RPL7P25-201ENST00000404151 721 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 RPS29P4-201ENST00000414733 161 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 CRYBB2P1-203ENST00000415709 538 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 EI24P1-201ENST00000416584 867 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 C1DP2-201ENST00000418167 426 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 EZH2P1-201ENST00000431167 291 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 UBE2V1P13-201ENST00000436983 439 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AL662791.1-201ENST00000441992 928 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 RPL21P23-201ENST00000446654 460 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC008264.1-201ENST00000447612 367 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 GAPDHP17-201ENST00000449858 1001 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 U3.44-201ENST00000458938 192 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 HMGB1P25-201ENST00000468402 607 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 MTND2P33-201ENST00000506452 1031 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AP003467.2-201ENST00000520175 319 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC022616.6-201ENST00000520479 119 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 OR4R3P-201ENST00000525084 838 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AP000907.2-201ENST00000530827 353 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 OR5B10P-201ENST00000532869 642 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC010546.1-201ENST00000569391 485 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 CKS1BP3-201ENST00000600888 237 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC087241.4-201ENST00000612441 480 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC009159.1-201ENST00000618386 642 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 PLCE1P1-201ENST00000622094 305 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC112204.3-201ENST00000623822 332 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC099654.13-201ENST00000639774 207 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
PCDH9Q9HC56 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDH9Q9HC56 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RNU6-1249P-201ENST00000363237 111 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RNU6-259P-201ENST00000383999 107 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RNU5A-6P-201ENST00000384136 116 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 Y_RNA.516-201ENST00000384541 124 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 MIR591-201ENST00000385290 95 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 U3.20-201ENST00000390909 217 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 SNORD115.1-201ENST00000391109 76 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 Z99755.1-201ENST00000414048 380 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AL356968.1-201ENST00000416622 474 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AL589872.1-201ENST00000426602 288 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC006548.1-201ENST00000427470 102 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 HMGN2P31-201ENST00000432430 273 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC104308.1-201ENST00000454621 333 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 HMGN1P18-201ENST00000457642 277 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RPS4XP13-201ENST00000483219 789 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AP002812.1-201ENST00000495378 474 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms