Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AL354943.1-201ENST00000572103 781 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 AL627309.6-201ENST00000606857 840 ntBASIC3.09□□□□□ -1.91
RNF41Q9H4P4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.09□□□□□ -1.91
RNF41Q9H4P4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 SNORD62.1-201ENST00000362541 86 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 RNU6-931P-201ENST00000363850 107 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC119751.3-201ENST00000399720 670 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AL139039.1-201ENST00000401900 692 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 USP9YP33-201ENST00000412220 421 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 MRPL50P2-201ENST00000416821 482 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 ZYG11AP1-201ENST00000430329 837 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 USP9YP35-201ENST00000435696 412 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 HSPE1P28-201ENST00000443139 211 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AL606662.1-201ENST00000445763 553 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 ARPC3P5-201ENST00000448802 534 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 RPL36AP33-201ENST00000450395 310 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 USP9YP10-201ENST00000454868 628 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 SNORA31.20-201ENST00000517111 133 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC022861.1-201ENST00000522981 663 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 SETP7-201ENST00000552169 453 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 MIR4999-201ENST00000585029 91 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 Z99289.3-201ENST00000605586 594 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AL390208.1-201ENST00000605885 644 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC004832.5-201ENST00000608677 401 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 TUSC7.1-201ENST00000610969 165 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC140725.3-201ENST00000616193 880 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AL136981.2-201ENST00000617319 734 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AL445264.1-201ENST00000621719 171 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC007998.5-201ENST00000622938 237 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AP000676.4-201ENST00000624659 623 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 DDX43P2-201ENST00000604753 1354 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AL022578.1-201ENST00000439330 1433 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF41Q9H4P4 AC002546.1-201ENST00000588041 2504 ntBASIC3.08□□□□□ -1.92
RNF41Q9H4P4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 RPL21P66-201ENST00000426566 466 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 HMGB1P12-201ENST00000438594 598 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 MTND5P14-201ENST00000441481 1267 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 MTND2P19-201ENST00000449129 1012 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 MTCO3P11-201ENST00000455103 774 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 COX7A2P2-201ENST00000505291 250 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC010625.1-201ENST00000511296 403 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC093677.1-201ENST00000514414 678 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC243972.3-201ENST00000539655 198 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 LRRC34P1-201ENST00000542742 915 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC126177.3-201ENST00000551839 688 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 MIR3162-201ENST00000581818 82 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC128687.1-201ENST00000605304 619 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AL357080.1-201ENST00000617394 239 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC009159.2-201ENST00000617603 606 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AL596245.1-201ENST00000618994 362 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AL353748.2-201ENST00000622148 471 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AC007256.1-201ENST00000392253 2765 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.07□□□□□ -1.92
RNF41Q9H4P4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AL391994.1-201ENST00000254724 282 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 USP9YP20-201ENST00000419224 558 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 MTCO2P5-201ENST00000422621 426 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms