Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC009902.3-201ENST00000606235 2172 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM4Q9C037 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
TRIM4Q9C037 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM4Q9C037 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM4Q9C037 RNU2-40P-201ENST00000410833 196 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 AC092745.2-202ENST00000411880 369 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM4Q9C037 AL356379.1-201ENST00000414105 126 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 UBE2V1P9-201ENST00000414760 368 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM4Q9C037 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM4Q9C037 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.25□□□□□ -2.05
TRIM4Q9C037 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.25□□□□□ -2.05
TRIM4Q9C037 MED28P6-201ENST00000558776 231 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 MIR4498-201ENST00000577599 66 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 AC068313.1-201ENST00000604028 1008 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
TRIM4Q9C037 uc_338.20-201ENST00000621563 178 ntBASIC2.25□□□□□ -2.05
TRIM4Q9C037 HSPE1P11-201ENST00000339579 310 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 RNU6-444P-201ENST00000383988 108 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 RNU6-1151P-201ENST00000384684 107 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM4Q9C037 SPA17P1-201ENST00000416656 452 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC099677.1-201ENST00000420575 175 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC018634.1-201ENST00000437554 401 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 OR6K5P-201ENST00000447050 945 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 RPL23AP49-201ENST00000492925 468 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC091917.2-201ENST00000505002 744 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC117522.2-201ENST00000510049 657 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC012669.1-201ENST00000603209 283 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 STMN1P1-201ENST00000617809 440 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 AL160394.1-201ENST00000624765 724 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 AC022336.2-201ENST00000568966 2538 ntBASIC2.24□□□□□ -2.05
TRIM4Q9C037 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM4Q9C037 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AL513185.3-201ENST00000433335 1300 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 RNU6-730P-201ENST00000383954 104 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 MIR489-201ENST00000384923 84 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AL590762.3-201ENST00000436372 640 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC104073.1-201ENST00000451988 151 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC233279.1-201ENST00000455300 423 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 RPS27P23-201ENST00000487608 251 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC083923.1-201ENST00000523708 376 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 OR5AQ1P-201ENST00000527596 927 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AL136363.1-201ENST00000605349 337 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.23□□□□□ -2.05
TRIM4Q9C037 AL353748.2-201ENST00000622148 471 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC024595.1-201ENST00000623088 387 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC092608.3-201ENST00000625017 386 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 AC111188.2-201ENST00000529697 1387 ntBASIC2.23□□□□□ -2.05
TRIM4Q9C037 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM4Q9C037 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 AP002784.2-201ENST00000397300 549 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 RN7SKP32-201ENST00000410167 303 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 AL121578.1-201ENST00000428051 892 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 MTND2P21-201ENST00000436242 1042 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 RPL7P54-201ENST00000438336 674 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 GPM6BP3-201ENST00000442797 145 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 AC104389.3-201ENST00000445629 235 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 MTND1P33-201ENST00000446251 917 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 AC004022.1-201ENST00000447766 1066 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 MTND2P19-201ENST00000449129 1012 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 MTCO3P11-201ENST00000455103 774 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 AC025281.1-201ENST00000567026 265 ntBASIC2.22□□□□□ -2.05
TRIM4Q9C037 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.22□□□□□ -2.05
TRIM4Q9C037 AC022387.2-201ENST00000604050 448 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms