Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.88□□□□□ -1.95
VGLL1Q99990 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VGLL1Q99990 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VGLL1Q99990 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.88□□□□□ -1.95
VGLL1Q99990 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.88□□□□□ -1.95
VGLL1Q99990 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.88□□□□□ -1.95
VGLL1Q99990 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.88□□□□□ -1.95
VGLL1Q99990 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VGLL1Q99990 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VGLL1Q99990 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VGLL1Q99990 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VGLL1Q99990 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VGLL1Q99990 Y_RNA.38-201ENST00000362617 102 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 RNA5SP130-201ENST00000364431 114 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 SNORA20.2-201ENST00000383922 131 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 RNU6-761P-201ENST00000384148 107 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 RNU6-114P-201ENST00000384704 105 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 RAP1BP3-201ENST00000407180 549 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 CCDC58P2-201ENST00000417131 366 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AL807761.1-201ENST00000417622 171 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 USP9YP27-201ENST00000418455 438 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC002075.2-201ENST00000425207 252 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.87□□□□□ -1.95
VGLL1Q99990 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 Z95327.1-201ENST00000446082 482 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 NANOGP10-201ENST00000453325 895 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC078785.3-201ENST00000476607 425 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 MTCYBP18-201ENST00000501056 747 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.87□□□□□ -1.95
VGLL1Q99990 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.87□□□□□ -1.95
VGLL1Q99990 RN7SKP209-201ENST00000516888 304 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 RNU6-528P-201ENST00000516926 100 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 RN7SKP60-201ENST00000516985 239 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 PTP4A1P6-201ENST00000531034 478 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 SETP2-201ENST00000553886 926 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC090616.5-202ENST00000582111 297 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC008752.3-201ENST00000588113 712 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC025449.1-201ENST00000603896 529 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC103710.2-201ENST00000609912 942 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC006329.2-201ENST00000611491 394 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
VGLL1Q99990 MIR6716-201ENST00000613413 80 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 AL590099.1-201ENST00000615276 138 ntBASIC2.87□□□□□ -1.95
VGLL1Q99990 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VGLL1Q99990 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VGLL1Q99990 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VGLL1Q99990 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VGLL1Q99990 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VGLL1Q99990 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.86□□□□□ -1.95
VGLL1Q99990 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VGLL1Q99990 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VGLL1Q99990 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VGLL1Q99990 RNA5SP443-201ENST00000363083 132 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 SNORA72.1-201ENST00000363485 129 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 RNVU1-3-201ENST00000364313 161 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 Y_RNA.295-201ENST00000364918 102 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.86□□□□□ -1.95
VGLL1Q99990 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
VGLL1Q99990 MIR199A2-201ENST00000385289 110 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 MT-TL1-201ENST00000386347 75 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 RPS26P8-201ENST00000393490 348 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VGLL1Q99990 AL049693.1-201ENST00000402760 611 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.86□□□□□ -1.95
VGLL1Q99990 MTATP6P18-201ENST00000417994 673 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 RPS12P23-201ENST00000419579 400 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.86□□□□□ -1.95
VGLL1Q99990 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.86□□□□□ -1.95
VGLL1Q99990 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.86□□□□□ -1.95
VGLL1Q99990 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.86□□□□□ -1.95
VGLL1Q99990 TPT1P14-201ENST00000448018 505 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 NUTF2P3-201ENST00000448540 384 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.86□□□□□ -1.95
VGLL1Q99990 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.86□□□□□ -1.95
VGLL1Q99990 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.86□□□□□ -1.95
VGLL1Q99990 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.86□□□□□ -1.95
VGLL1Q99990 snoU109.4-201ENST00000458953 143 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 AP002884.2-201ENST00000471647 395 ntBASIC2.86□□□□□ -1.95
VGLL1Q99990 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.86□□□□□ -1.95
VGLL1Q99990 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.86□□□□□ -1.95
VGLL1Q99990 AC023194.1-201ENST00000493084 308 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms