Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.32□□□□□ -2.04
VAT1Q99536 MTCYBP15-201ENST00000433123 1127 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.32□□□□□ -2.04
VAT1Q99536 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AL353691.1-201ENST00000451332 387 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 RPS27P26-201ENST00000494583 239 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.32□□□□□ -2.04
VAT1Q99536 CDC42P4-201ENST00000510507 563 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AC008716.1-201ENST00000511084 513 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 RN7SKP40-201ENST00000517211 242 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AC023632.1-201ENST00000518463 375 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.32□□□□□ -2.04
VAT1Q99536 AC027309.2-201ENST00000520566 192 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 OR4R1P-201ENST00000529879 463 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.32□□□□□ -2.04
VAT1Q99536 AC024224.1-201ENST00000538284 609 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.32□□□□□ -2.04
VAT1Q99536 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.32□□□□□ -2.04
VAT1Q99536 HMGB1P14-201ENST00000557424 591 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AC090888.1-201ENST00000561335 1141 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AC090330.1-201ENST00000588646 764 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.32□□□□□ -2.04
VAT1Q99536 DUXAP3-201ENST00000603616 594 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.32□□□□□ -2.04
VAT1Q99536 AL161734.1-201ENST00000609720 557 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 AC011330.2-201ENST00000621680 635 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VAT1Q99536 AC008669.1-201ENST00000565823 2178 ntBASIC2.32□□□□□ -2.04
VAT1Q99536 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VAT1Q99536 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
VAT1Q99536 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VAT1Q99536 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
VAT1Q99536 RNU6-609P-201ENST00000365459 107 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 MIR627-201ENST00000384979 97 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 RPL22P22-201ENST00000395439 379 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 U3.37-201ENST00000408528 213 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 FAM204CP-201ENST00000424489 642 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.31□□□□□ -2.04
VAT1Q99536 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.31□□□□□ -2.04
VAT1Q99536 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.31□□□□□ -2.04
VAT1Q99536 ARPC3P1-201ENST00000437218 533 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.31□□□□□ -2.04
VAT1Q99536 AL121871.1-201ENST00000443413 436 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AL109741.2-201ENST00000455561 343 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.31□□□□□ -2.04
VAT1Q99536 TTC39CP1-201ENST00000512513 755 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AC027338.1-201ENST00000514840 825 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.31□□□□□ -2.04
VAT1Q99536 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.31□□□□□ -2.04
VAT1Q99536 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VAT1Q99536 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.31□□□□□ -2.04
VAT1Q99536 AC044913.1-201ENST00000557200 430 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AMZ2P1-203ENST00000565833 850 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.31□□□□□ -2.04
VAT1Q99536 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.31□□□□□ -2.04
VAT1Q99536 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VAT1Q99536 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.31□□□□□ -2.04
VAT1Q99536 AP001542.2-201ENST00000593141 364 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 BNIP3P24-201ENST00000593398 557 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 TUG1_1.1-201ENST00000610654 145 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AC090132.2-201ENST00000615881 347 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AC006213.4-201ENST00000616184 634 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AC009831.4-201ENST00000620744 325 ntBASIC2.31□□□□□ -2.04
VAT1Q99536 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VAT1Q99536 HMGB1P5-201ENST00000255320 642 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 RNU6-1300P-201ENST00000391046 108 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VAT1Q99536 AF274854.1-201ENST00000413236 615 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 LUZP4P1-201ENST00000415420 344 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.3□□□□□ -2.04
VAT1Q99536 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AC007742.1-201ENST00000425789 329 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 ELOCP26-201ENST00000436067 329 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 THAP5P1-201ENST00000439089 262 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AL714022.1-201ENST00000439897 151 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.3□□□□□ -2.04
VAT1Q99536 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.3□□□□□ -2.04
VAT1Q99536 WASF1P1-201ENST00000447560 1131 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 MRPL42P4-201ENST00000453267 443 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.3□□□□□ -2.04
VAT1Q99536 AC116337.2-201ENST00000477662 156 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AC004263.1-201ENST00000479327 332 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AC010460.2-201ENST00000509054 677 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 RNU5A-7P-201ENST00000515979 116 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 MTCYBP20-201ENST00000524239 1129 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.3□□□□□ -2.04
VAT1Q99536 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.3□□□□□ -2.04
VAT1Q99536 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.3□□□□□ -2.04
VAT1Q99536 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.3□□□□□ -2.04
VAT1Q99536 AC010546.1-201ENST00000569391 485 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AC007938.3-201ENST00000604965 623 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.3□□□□□ -2.04
VAT1Q99536 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
VAT1Q99536 AC093536.2-201ENST00000565257 1406 ntBASIC2.3□□□□□ -2.04
VAT1Q99536 Z99496.1-201ENST00000469424 1477 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms