Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RNU4-21P-201ENST00000362802 126 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 RNU6-289P-201ENST00000364093 107 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 U3.29-201ENST00000391296 212 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AL031679.1-201ENST00000400616 525 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 PSMA6P3-201ENST00000428242 164 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 SNRPEP7-201ENST00000438350 220 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 RPL23AP33-201ENST00000442301 452 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AL590399.6-201ENST00000446396 307 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC093809.1-201ENST00000509155 340 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC093331.1-201ENST00000521474 169 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC022861.1-201ENST00000522981 663 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 CENPUP2-201ENST00000555897 1186 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AP001004.1-201ENST00000582468 324 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC004223.2-201ENST00000590309 544 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC092354.1-201ENST00000606057 376 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC012531.5-201ENST00000611375 151 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC004009.2-201ENST00000623016 728 ntBASIC3.97□□□□□ -1.77
SIN3AQ96ST3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.97□□□□□ -1.77
SIN3AQ96ST3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 RNU6-989P-201ENST00000362756 107 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 RNU6-328P-201ENST00000390887 106 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AL360182.1-201ENST00000397433 468 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC016907.1-201ENST00000419483 435 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 MTCYBP24-201ENST00000420387 1106 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC007742.1-201ENST00000425789 329 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC098826.1-201ENST00000433943 471 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC244505.4-201ENST00000434905 287 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 ELOCP26-201ENST00000436067 329 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 MUPP-201ENST00000438111 566 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 LSM1P1-201ENST00000438629 273 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 MTND1P30-201ENST00000441241 901 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 TRIM60P18-201ENST00000441518 828 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 SSXP5-201ENST00000443473 287 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 TAF9P1-201ENST00000445421 515 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC002381.1-201ENST00000447049 280 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 EPS15P1-201ENST00000448836 336 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 TAF9P2-201ENST00000454958 515 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AL049830.2-201ENST00000480072 201 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC034159.1-201ENST00000513885 583 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 IGKV2-23-201ENST00000518729 323 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC060788.1-201ENST00000521318 469 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 HIGD1AP10-201ENST00000527837 282 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC138761.3-201ENST00000579993 334 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC107294.3-201ENST00000609211 526 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC073114.1-201ENST00000612027 490 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AL357080.1-201ENST00000617394 239 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.96□□□□□ -1.78
SIN3AQ96ST3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SIN3AQ96ST3 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 Y_RNA.77-201ENST00000362962 107 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 RNU6-525P-201ENST00000363685 104 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 RNVU1-3-201ENST00000364313 161 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 RPL31P45-201ENST00000419532 356 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 AL590233.1-201ENST00000430017 456 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 MED14P1-201ENST00000430517 648 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 CKS1BP5-201ENST00000434172 273 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 HSPE1P28-201ENST00000443139 211 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.95□□□□□ -1.78
SIN3AQ96ST3 CEACAMP4-201ENST00000457676 421 ntBASIC3.95□□□□□ -1.78
SIN3AQ96ST3 HMGB1P25-201ENST00000468402 607 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms