Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 MIR1-1-201ENST00000362147 71 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.70-201ENST00000362886 110 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 SNORA72.3-201ENST00000365074 132 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 RNU6-979P-201ENST00000383896 107 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 Y_RNA.464-201ENST00000384282 110 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 RNU6-131P-201ENST00000391144 107 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 SDHCP2-201ENST00000398565 501 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 Z98745.1-201ENST00000402553 494 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 RPS3AP37-201ENST00000419176 745 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 RPL21P32-201ENST00000419877 477 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC009414.1-201ENST00000427200 443 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 MTCO1P52-201ENST00000433928 531 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 ELOCP18-201ENST00000434209 337 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 C1DP3-201ENST00000455013 423 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 PTGES3P5-201ENST00000455109 434 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 RNU6-300P-201ENST00000459080 104 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC104982.1-201ENST00000478775 574 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 KC877373.1-201ENST00000479066 408 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC015688.2-201ENST00000584523 262 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 BPIFA4P-203ENST00000603168 689 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 U3.45-201ENST00000607547 219 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC079597.1-201ENST00000624306 508 ntBASIC1.4□□□□□ -2.18
HMCN1Q96RW7 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
HMCN1Q96RW7 AC093908.1-201ENST00000623125 8092 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 OR56B2P-201ENST00000317102 954 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 SNORA38.1-201ENST00000364172 131 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNA5SP90-201ENST00000364801 99 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6-937P-201ENST00000384325 106 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 NDUFS5P1-201ENST00000405668 289 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6-721P-201ENST00000410155 105 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 EIF4A1P3-201ENST00000411521 244 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC092634.6-201ENST00000418558 192 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RPL31P45-201ENST00000419532 356 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 DPH3P2-201ENST00000422618 250 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL162388.1-201ENST00000450912 352 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.631-201ENST00000459607 101 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RN7SL189P-201ENST00000468631 289 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.711-201ENST00000516993 102 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC007458.1-201ENST00000542812 373 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL360157.1-201ENST00000565962 87 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 BNIP3P38-201ENST00000601117 544 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 HSPE1P19-201ENST00000603327 295 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC245008.1-201ENST00000608123 476 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC244107.2-201ENST00000611773 76 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 MIR7151-201ENST00000617477 60 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 MR1-209ENST00000617803 7584 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms