Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC7Q96M83 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC7Q96M83 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC7Q96M83 RNU4-51P-201ENST00000364206 140 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 OR5H15-201ENST00000383696 930 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 RNU1-138P-201ENST00000384093 164 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 RNU6-482P-201ENST00000391068 107 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 SNRPEP2-201ENST00000397592 279 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 RPS3AP26-201ENST00000398259 784 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC7Q96M83 AL161449.1-201ENST00000414531 1199 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AL137014.1-201ENST00000420490 1226 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC007435.1-201ENST00000421086 415 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC012497.1-201ENST00000429392 575 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 RPS15AP28-201ENST00000435088 386 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC7Q96M83 MTATP6P14-201ENST00000455189 673 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 FCF1P6-201ENST00000456841 595 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC7Q96M83 AL024509.2-201ENST00000493462 493 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC7Q96M83 RNA5SP281-201ENST00000516504 135 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC009163.5-201ENST00000575421 637 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC011468.4-201ENST00000603942 409 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC069545.1-201ENST00000605671 358 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC7Q96M83 AL121652.1-201ENST00000608851 448 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 PART1_2.1-201ENST00000612397 250 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC092650.2-201ENST00000619984 902 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC7Q96M83 OR1S1-201ENST00000624470 978 ntBASIC3.23□□□□□ -1.89
CCDC7Q96M83 AC107982.1-201ENST00000507171 1300 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC7Q96M83 RNU5E-10P-201ENST00000363506 118 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC092447.6-201ENST00000414578 210 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC7Q96M83 Z75741.2-201ENST00000417272 1167 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC7Q96M83 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC7Q96M83 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC7Q96M83 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC7Q96M83 DPPA2P1-201ENST00000428060 556 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 SETP8-201ENST00000435341 628 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC104058.1-201ENST00000448028 297 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 HMGN2P16-201ENST00000456802 261 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 RPL21P104-201ENST00000464143 478 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 RPL30P9-201ENST00000465586 330 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC108734.3-201ENST00000481241 1165 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 MTCO3P35-201ENST00000485582 781 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC006390.1-201ENST00000508068 283 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC7Q96M83 MTCO2P32-201ENST00000514865 403 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
CCDC7Q96M83 SYF2P1-201ENST00000550658 413 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 EEF1B2P4-201ENST00000551398 348 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC069431.2-201ENST00000604149 1099 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC025754.2-201ENST00000606491 432 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC090425.2-201ENST00000608818 501 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AL158163.2-201ENST00000619110 700 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 MIR6766-201ENST00000622641 72 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 AC091925.2-201ENST00000625059 256 ntBASIC3.22□□□□□ -1.89
CCDC7Q96M83 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC7Q96M83 RNU5D-1-201ENST00000363299 116 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 MIR506-201ENST00000384998 124 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 U3.37-201ENST00000408528 213 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 RNU2-15P-201ENST00000410692 191 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 MRPS36P1-201ENST00000421291 307 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 MTCO1P53-201ENST00000441633 699 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 PTGES3P5-201ENST00000455109 434 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 AC027673.1-201ENST00000456245 405 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 snoU13.4-201ENST00000458916 104 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 AC034268.2-201ENST00000571784 482 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 MTND3P13-201ENST00000574391 343 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 AC055876.5-201ENST00000605667 259 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 AC024257.5-201ENST00000612739 531 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 AL450472.3-201ENST00000615578 367 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 PISRT1-201ENST00000626175 531 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 U6.101-201ENST00000637707 76 ntBASIC3.21□□□□□ -1.9
CCDC7Q96M83 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC7Q96M83 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC7Q96M83 AC097714.1-201ENST00000511272 1647 ntBASIC3.2□□□□□ -1.9
CCDC7Q96M83 SNORD116-12-201ENST00000384468 92 ntBASIC3.2□□□□□ -1.9
CCDC7Q96M83 SNORA40.2-201ENST00000390847 128 ntBASIC3.2□□□□□ -1.9
CCDC7Q96M83 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC7Q96M83 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC7Q96M83 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms