Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-790P-201ENST00000384479 105 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CALR3Q96L12 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.6□□□□□ -1.51
CALR3Q96L12 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.6□□□□□ -1.51
CALR3Q96L12 AC096644.2-201ENST00000429278 159 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 AC099799.1-201ENST00000439809 192 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.6□□□□□ -1.51
CALR3Q96L12 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CALR3Q96L12 RN7SL273P-201ENST00000481561 299 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 RPS4XP1-201ENST00000482189 787 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.6□□□□□ -1.51
CALR3Q96L12 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.6□□□□□ -1.51
CALR3Q96L12 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.6□□□□□ -1.51
CALR3Q96L12 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.6□□□□□ -1.51
CALR3Q96L12 AC015720.2-201ENST00000567709 334 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.6□□□□□ -1.51
CALR3Q96L12 AC092447.9-201ENST00000603395 144 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.6□□□□□ -1.51
CALR3Q96L12 Z69720.2-201ENST00000624755 279 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.6□□□□□ -1.51
CALR3Q96L12 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.6□□□□□ -1.51
CALR3Q96L12 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
CALR3Q96L12 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CALR3Q96L12 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.6□□□□□ -1.51
CALR3Q96L12 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALR3Q96L12 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.59□□□□□ -1.51
CALR3Q96L12 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALR3Q96L12 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.59□□□□□ -1.51
CALR3Q96L12 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALR3Q96L12 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CALR3Q96L12 MIR412-201ENST00000362142 91 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 Y_RNA.455-201ENST00000384230 98 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 RN7SKP126-201ENST00000411143 300 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 HMGB3P2-201ENST00000411913 584 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 SDHDP6-201ENST00000414693 480 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CALR3Q96L12 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.59□□□□□ -1.51
CALR3Q96L12 CYP4F29P-201ENST00000420685 446 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 RPL27AP8-201ENST00000424277 446 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 HMGN2P21-201ENST00000447764 270 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.59□□□□□ -1.51
CALR3Q96L12 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.59□□□□□ -1.51
CALR3Q96L12 SNORA31.8-201ENST00000516327 108 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 AC022882.1-201ENST00000532142 501 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 TOMM20P1-201ENST00000534518 427 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.59□□□□□ -1.51
CALR3Q96L12 SUB1P3-201ENST00000564581 315 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 MIR4271-201ENST00000582451 67 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 MIR5010-201ENST00000582846 120 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.59□□□□□ -1.51
CALR3Q96L12 AL138895.2-201ENST00000603019 178 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 7SK.7-201ENST00000603504 247 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CALR3Q96L12 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.59□□□□□ -1.51
CALR3Q96L12 AC074101.1-201ENST00000637861 241 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 AC119674.1-207ENST00000641355 633 ntBASIC5.59□□□□□ -1.51
CALR3Q96L12 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.59□□□□□ -1.51
CALR3Q96L12 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.59□□□□□ -1.51
CALR3Q96L12 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.59□□□□□ -1.51
CALR3Q96L12 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.59□□□□□ -1.51
CALR3Q96L12 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CALR3Q96L12 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.59□□□□□ -1.52
CALR3Q96L12 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 RN7SKP187-201ENST00000365536 330 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 MIR1302-3-201ENST00000408128 138 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AC073073.1-201ENST00000493920 463 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 HMGN1P11-201ENST00000508668 303 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AP004607.2-201ENST00000533949 322 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 AC004024.1-201ENST00000549244 247 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AC010547.6-201ENST00000571789 193 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 AC123912.5-201ENST00000605470 343 ntBASIC5.58□□□□□ -1.52
CALR3Q96L12 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.58□□□□□ -1.52
CALR3Q96L12 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.58□□□□□ -1.52
CALR3Q96L12 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CALR3Q96L12 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CALR3Q96L12 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CALR3Q96L12 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CALR3Q96L12 Z95331.1-201ENST00000623075 23112 ntBASIC5.57□□□□□ -1.52
CALR3Q96L12 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms