Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU6-278P-201ENST00000390945 109 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL359634.1-202ENST00000404721 284 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RPL7P2-201ENST00000427639 268 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 HMGB3P11-201ENST00000440127 604 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC013267.1-201ENST00000458227 267 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RPL30P6-201ENST00000475925 342 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RN7SL132P-201ENST00000478131 296 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RNU6-927P-201ENST00000516199 100 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RNU6-390P-201ENST00000516259 103 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 RNU6-201P-201ENST00000517100 61 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 SNORA31.21-201ENST00000517180 77 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC007115.1-201ENST00000546853 234 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC091489.2-201ENST00000566263 604 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL356432.3-201ENST00000568952 465 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 MTCO3P24-201ENST00000572729 782 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC136624.4-201ENST00000573044 370 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 MTCYBP22-201ENST00000603788 447 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL360219.1-201ENST00000610230 366 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 AC127502.3-201ENST00000636170 1206 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS33AQ96AX1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.24□□□□□ -1.89
VPS33AQ96AX1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 RNU6-1284P-201ENST00000363701 100 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 U3.11-201ENST00000364476 212 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 RPL7P25-201ENST00000404151 721 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 RPL7P8-201ENST00000411964 730 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL035423.1-201ENST00000420331 213 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 RPL7P46-201ENST00000425129 740 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL353777.1-201ENST00000425552 326 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 DPPA2P1-201ENST00000428060 556 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC129850.1-201ENST00000436203 508 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 GDI2P2-201ENST00000445131 608 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 snoU13.28-201ENST00000459235 104 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 KC877373.1-201ENST00000479066 408 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 RPS3AP22-201ENST00000488297 769 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC005178.1-201ENST00000508392 440 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 HMGN1P11-201ENST00000508668 303 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 MTND5P13-201ENST00000513046 1079 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC116347.2-201ENST00000514912 523 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 RNU6-64P-201ENST00000517119 105 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 GTF2IP22-201ENST00000554443 182 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC008015.1-201ENST00000555505 465 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL353778.1-201ENST00000603149 408 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC010591.1-201ENST00000603941 649 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL136363.1-201ENST00000605349 337 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC245517.5-201ENST00000611529 162 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC090970.3-201ENST00000612566 866 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL356266.1-201ENST00000623311 483 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC079248.2-201ENST00000623779 326 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC079416.3-201ENST00000624479 549 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 AC092192.1-201ENST00000633154 1018 ntBASIC3.23□□□□□ -1.89
VPS33AQ96AX1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VPS33AQ96AX1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS33AQ96AX1 SDCBPP3-201ENST00000419629 891 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 ZNF863P-201ENST00000426746 417 ntBASIC3.22□□□□□ -1.89
VPS33AQ96AX1 AC007919.1-201ENST00000429380 217 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms