Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.79□□□□□ -1.64
RTF1Q92541 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTF1Q92541 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTF1Q92541 AL359893.1-201ENST00000447628 1580 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AC007823.1-201ENST00000569932 1566 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.78□□□□□ -1.64
RTF1Q92541 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.78□□□□□ -1.64
RTF1Q92541 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTF1Q92541 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTF1Q92541 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTF1Q92541 SNORD9-201ENST00000362566 104 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 RNU6-1322P-201ENST00000364309 107 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 RNA5SP44-201ENST00000410446 133 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AMD1P2-201ENST00000412936 992 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AC127526.1-201ENST00000417526 366 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AC006548.1-201ENST00000427470 102 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.78□□□□□ -1.64
RTF1Q92541 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTF1Q92541 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.78□□□□□ -1.64
RTF1Q92541 RPS20P24-201ENST00000457473 361 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 SNORD121B-201ENST00000458838 81 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 RPS29P25-201ENST00000481709 171 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.78□□□□□ -1.64
RTF1Q92541 MTCO3P44-201ENST00000510977 541 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.78□□□□□ -1.64
RTF1Q92541 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.78□□□□□ -1.64
RTF1Q92541 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.78□□□□□ -1.64
RTF1Q92541 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.78□□□□□ -1.64
RTF1Q92541 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.78□□□□□ -1.64
RTF1Q92541 AL355812.1-201ENST00000603215 216 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AL020991.1-201ENST00000612314 373 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AC084757.4-201ENST00000616350 526 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AC004825.2-201ENST00000616634 455 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 CR381572.1-201ENST00000625098 102 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 AL133412.1-201ENST00000380194 2992 ntBASIC4.78□□□□□ -1.64
RTF1Q92541 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTF1Q92541 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.78□□□□□ -1.64
RTF1Q92541 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.78□□□□□ -1.64
RTF1Q92541 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTF1Q92541 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.77□□□□□ -1.65
RTF1Q92541 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RTF1Q92541 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTF1Q92541 SNORA63.1-201ENST00000362493 131 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 RNY1P12-201ENST00000364251 105 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTF1Q92541 RNU6-877P-201ENST00000383868 107 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTF1Q92541 CRYBB2P1-203ENST00000415709 538 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 MTATP6P18-201ENST00000417994 673 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AL353193.1-201ENST00000421444 268 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AC137499.1-201ENST00000427602 88 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.77□□□□□ -1.65
RTF1Q92541 AC006946.1-201ENST00000429106 328 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 MTND1P9-201ENST00000453775 944 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.77□□□□□ -1.65
RTF1Q92541 RPL7P49-201ENST00000471402 708 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 RN7SKP13-201ENST00000515933 244 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 RNU6-1281P-201ENST00000516223 105 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 RN7SKP209-201ENST00000516888 304 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.77□□□□□ -1.65
RTF1Q92541 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.77□□□□□ -1.65
RTF1Q92541 AC104383.1-201ENST00000530297 370 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 OR5B10P-201ENST00000532869 642 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTF1Q92541 ADI1P3-201ENST00000549509 470 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.77□□□□□ -1.65
RTF1Q92541 AC060780.3-201ENST00000589464 80 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.77□□□□□ -1.65
RTF1Q92541 BRDTP1-201ENST00000605735 677 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AL357559.1-201ENST00000622228 274 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AC243312.2-201ENST00000623340 601 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AP003122.6-201ENST00000623831 495 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AC009161.2-201ENST00000624626 138 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AC005609.4-201ENST00000625071 447 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.77□□□□□ -1.65
RTF1Q92541 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTF1Q92541 PABPC1P7-201ENST00000413177 1513 ntBASIC4.77□□□□□ -1.65
RTF1Q92541 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTF1Q92541 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTF1Q92541 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.76□□□□□ -1.65
RTF1Q92541 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTF1Q92541 RN7SKP44-201ENST00000363602 316 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 RNY4P16-201ENST00000364768 94 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 RNU6-169P-201ENST00000365336 107 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 RNU6-108P-201ENST00000365558 107 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 RNU6-339P-201ENST00000384310 107 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 SNORD51-201ENST00000384320 80 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 MT-TL1-201ENST00000386347 75 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.76□□□□□ -1.65
RTF1Q92541 AC009237.5-201ENST00000414271 501 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC068533.1-201ENST00000418542 415 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 ZNF90P2-204ENST00000419323 1075 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC092832.1-201ENST00000422934 400 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.76□□□□□ -1.65
RTF1Q92541 USP12PX-201ENST00000432383 1057 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC073063.1-201ENST00000434352 607 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.76□□□□□ -1.65
RTF1Q92541 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.76□□□□□ -1.65
RTF1Q92541 CALM1P1-201ENST00000442082 433 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 RPL21P23-201ENST00000446654 460 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms