Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC091925.1-201ENST00000623204 462 ntBASIC4.65□□□□□ -1.67
SH3RF3Q8TEJ3 AC055839.1-201ENST00000634467 498 ntBASIC4.65□□□□□ -1.67
SH3RF3Q8TEJ3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SH3RF3Q8TEJ3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SH3RF3Q8TEJ3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SH3RF3Q8TEJ3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SH3RF3Q8TEJ3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SH3RF3Q8TEJ3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 NUP58P1-201ENST00000502546 1738 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 ZNF285B-201ENST00000561698 1767 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 Y_RNA.25-201ENST00000362528 102 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 SNORA32.2-201ENST00000384049 122 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 Y_RNA.445-201ENST00000384168 102 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 NDUFB4P5-201ENST00000415445 361 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AL139247.1-201ENST00000422768 325 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC105402.2-201ENST00000438503 358 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 RPS15AP9-201ENST00000439856 381 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 SUMO1P2-201ENST00000452524 304 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 MEMO1P3-201ENST00000459811 302 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 RPL21P11-201ENST00000461458 483 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 MRPS17P3-201ENST00000465453 385 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AL135752.1-201ENST00000479477 471 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC114797.1-201ENST00000514003 728 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 RNU4-49P-201ENST00000516080 140 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 Y_RNA.718-201ENST00000517110 102 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 RNU6-1314P-201ENST00000517139 104 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 POLR3GP2-201ENST00000588366 668 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC007390.2-201ENST00000606229 3803 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC005344.1-201ENST00000613391 459 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC000123.2-201ENST00000623124 461 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC231657.1-201ENST00000624313 397 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AL133216.2-202ENST00000634512 349 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 AC025125.1-201ENST00000624743 1922 ntBASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SH3RF3Q8TEJ3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 RNU6-223P-201ENST00000362830 107 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 RPS20P2-201ENST00000402520 389 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AL592114.1-201ENST00000403842 483 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 MIR1302-3-201ENST00000408128 138 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 MIR548F4-201ENST00000408515 105 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC092634.6-201ENST00000418558 192 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 RPS26P40-201ENST00000435209 294 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 HMGB1P37-201ENST00000439613 609 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC073587.1-201ENST00000447093 876 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 MTND1P9-201ENST00000453775 944 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 RPL5P30-201ENST00000465511 891 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC006499.6-201ENST00000511169 607 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 SNORA48.10-201ENST00000516965 160 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC022695.1-201ENST00000522089 237 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 COPS8P3-201ENST00000526024 482 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC005668.1-201ENST00000571142 476 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AC080078.3-201ENST00000605407 463 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AL365434.2-201ENST00000607979 234 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AL161734.1-201ENST00000609720 557 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 MTND4LP32-201ENST00000636111 270 ntBASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SH3RF3Q8TEJ3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AP004289.2-201ENST00000444413 1457 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms