Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MTND4LP10-201ENST00000435146 291 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AL031667.1-201ENST00000440222 725 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01006Q8NI28 ST13P20-201ENST00000447996 1065 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC140076.1-201ENST00000449897 361 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AL590365.1-201ENST00000450788 243 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 MTCO2P18-201ENST00000457151 658 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC021382.1-201ENST00000483523 359 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC106872.2-201ENST00000494303 480 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AP001086.1-201ENST00000494882 321 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC091435.1-201ENST00000505442 584 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.55□□□□□ -2
LINC01006Q8NI28 CBX3P3-201ENST00000508108 532 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.55□□□□□ -2
LINC01006Q8NI28 IGKV2D-23-201ENST00000518179 286 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01006Q8NI28 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC109635.4-202ENST00000531666 412 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 RFPL1S-203ENST00000539579 330 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC024909.2-201ENST00000553035 286 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AL121603.1-201ENST00000553815 142 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC092125.1-201ENST00000562568 1995 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC017071.1-201ENST00000564407 2204 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC009101.1-201ENST00000568135 242 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC099489.2-201ENST00000574976 260 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 OR4K8P-201ENST00000578842 1048 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 AL590282.1-201ENST00000610379 1136 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 RNVU1-4-201ENST00000612985 164 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.55□□□□□ -2
LINC01006Q8NI28 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01006Q8NI28 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01006Q8NI28 AC004925.1-201ENST00000624256 2706 ntBASIC2.55□□□□□ -2
LINC01006Q8NI28 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.54□□□□□ -2
LINC01006Q8NI28 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01006Q8NI28 GABPAP-201ENST00000419271 1356 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 RPS4XP5-202ENST00000449995 1334 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 RNU6-600P-201ENST00000362524 99 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RNU1-70P-201ENST00000362618 164 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 Y_RNA.46-201ENST00000362695 102 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 SNORA80A-201ENST00000363922 136 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RNU6-7-201ENST00000364784 107 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RNU6-8-201ENST00000365467 107 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 SNORA75-201ENST00000384158 137 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RNU6-297P-201ENST00000384636 107 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RNU6-114P-201ENST00000384704 105 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AL359704.1-201ENST00000411586 781 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 MTCO3P12-201ENST00000416718 547 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 SSXP9-201ENST00000417503 292 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.54□□□□□ -2
LINC01006Q8NI28 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.54□□□□□ -2
LINC01006Q8NI28 RPL35AP12-201ENST00000425362 338 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RPL23AP69-201ENST00000431134 458 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.54□□□□□ -2
LINC01006Q8NI28 USP9YP12-201ENST00000450481 570 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.54□□□□□ -2
LINC01006Q8NI28 RNA5SP269-201ENST00000459032 137 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RPL9P32-201ENST00000464118 620 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 AC096576.1-201ENST00000489014 359 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 RPL23AP55-201ENST00000498163 452 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC097462.2-201ENST00000504623 481 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 SNORA31.20-201ENST00000517111 133 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC107934.2-201ENST00000518653 310 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AP000873.5-201ENST00000533906 236 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.54□□□□□ -2
LINC01006Q8NI28 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.54□□□□□ -2
LINC01006Q8NI28 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.54□□□□□ -2
LINC01006Q8NI28 AC087481.2-201ENST00000565492 330 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01006Q8NI28 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.54□□□□□ -2
LINC01006Q8NI28 MIR3690-201ENST00000580266 75 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 MIR4298-201ENST00000584380 73 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 TPMTP1-201ENST00000592307 737 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC112191.3-201ENST00000604371 277 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AL034351.1-201ENST00000605288 668 ntBASIC2.54□□□□□ -2
LINC01006Q8NI28 AC093732.2-201ENST00000607950 274 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms