Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 COX6CP2-201ENST00000444980 225 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AL592447.1-201ENST00000447592 540 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 VN1R104P-201ENST00000505115 1009 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 MTND1P22-201ENST00000510572 951 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 RN7SKP13-201ENST00000515933 244 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 RN7SKP18-201ENST00000516005 275 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC107934.1-201ENST00000522215 217 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AL157394.1-201ENST00000562983 1224 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AL356432.3-201ENST00000568952 465 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC012182.1-201ENST00000570133 895 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 DPPA3P3-201ENST00000603842 430 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC007038.2-201ENST00000608095 740 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC006023.2-201ENST00000609916 167 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 BX664608.1-201ENST00000610519 487 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC093783.1-201ENST00000612976 329 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 Z69908.1-201ENST00000622603 247 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC009902.3-201ENST00000606235 2172 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
BEST4Q8NFU0 AC010733.2-201ENST00000589496 5702 ntBASIC2.78□□□□□ -1.96
BEST4Q8NFU0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.78□□□□□ -1.97
BEST4Q8NFU0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
BEST4Q8NFU0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 FAM35CP-201ENST00000554755 2470 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 RNU5A-1-201ENST00000362698 116 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 RPL7P25-201ENST00000404151 721 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 RPL7P46-201ENST00000425129 740 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC233728.2-201ENST00000425348 757 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 CYCSP4-201ENST00000429682 331 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC092573.2-201ENST00000434546 243 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC129850.1-201ENST00000436203 508 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 USP9YP12-201ENST00000450481 570 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC073387.1-201ENST00000453261 709 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 RPL21P104-201ENST00000464143 478 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 RPS23P3-201ENST00000470993 430 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC006483.1-201ENST00000487308 313 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 APOOP4-201ENST00000513530 597 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 RNU6-390P-201ENST00000516259 103 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 RNU6-840P-201ENST00000517275 65 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC022616.6-201ENST00000520479 119 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AP003122.4-201ENST00000530980 758 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL133153.1-201ENST00000557756 303 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 HMGN1P30-201ENST00000589286 268 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC068790.3-201ENST00000602988 553 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL590229.1-201ENST00000603497 542 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC015871.2-201ENST00000603605 948 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AL590392.1-201ENST00000604960 446 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AP000860.1-201ENST00000605250 559 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 AC009159.1-201ENST00000618386 642 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 LRRC77P-213ENST00000637727 880 ntBASIC2.77□□□□□ -1.97
BEST4Q8NFU0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
BEST4Q8NFU0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
BEST4Q8NFU0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
BEST4Q8NFU0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms