Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL590099.1-201ENST00000615276 138 ntBASIC4.15□□□□□ -1.75
SIMC1Q8NDZ2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.15□□□□□ -1.75
SIMC1Q8NDZ2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.15□□□□□ -1.75
SIMC1Q8NDZ2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SIMC1Q8NDZ2 USP8P1-201ENST00000494673 3183 ntBASIC4.15□□□□□ -1.75
SIMC1Q8NDZ2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
SIMC1Q8NDZ2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIMC1Q8NDZ2 AC018555.1-201ENST00000567548 1980 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-1207P-201ENST00000384343 107 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 MIR129-1-201ENST00000384972 72 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AL583835.1-201ENST00000399570 407 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-1148P-201ENST00000410992 104 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 CYP4F29P-201ENST00000420685 446 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AL138799.3-201ENST00000438968 350 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 RN7SKP13-201ENST00000515933 244 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 SNORD60.2-201ENST00000516883 86 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC022616.3-201ENST00000523940 148 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC113139.1-201ENST00000605049 239 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AC090617.10-201ENST00000624308 134 ntBASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.14□□□□□ -1.75
SIMC1Q8NDZ2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC092125.1-201ENST00000562568 1995 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-1155P-201ENST00000363554 107 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-853P-201ENST00000364306 107 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-108P-201ENST00000365558 107 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 SNORA32.2-201ENST00000384049 122 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-629P-201ENST00000384061 103 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 U3.22-201ENST00000391120 215 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 SDHCP2-201ENST00000398565 501 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 TXNP7-201ENST00000406296 293 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 RNU2-47P-201ENST00000410649 186 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 ELOCP19-201ENST00000411919 318 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC007283.2-201ENST00000424739 197 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 DHFRP3-201ENST00000455595 559 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 snoU13.4-201ENST00000458916 104 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC021382.1-201ENST00000483523 359 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 RN7SL604P-201ENST00000492589 296 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC004062.1-201ENST00000509926 645 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC090572.1-201ENST00000519251 160 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC107934.1-201ENST00000522215 217 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 PSMA2P1-201ENST00000526365 646 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AP003072.2-201ENST00000527756 676 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 CYP4A43P-201ENST00000568156 121 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 HMGB1P6-201ENST00000569046 646 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC093227.2-201ENST00000589357 285 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC020914.4-201ENST00000597690 277 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC012669.1-201ENST00000603209 283 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 HMGB1P50-201ENST00000605814 607 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC116312.1-201ENST00000606841 314 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 Z98200.1-201ENST00000607298 470 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AL161637.1-201ENST00000622380 412 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms