Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RPL30P11-201ENST00000495304 339 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AC110792.2-201ENST00000510278 224 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.718-201ENST00000517110 102 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 SNORA25.17-201ENST00000517184 124 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AL031666.3-201ENST00000609320 1006 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 AC064801.1-201ENST00000612025 407 ntBASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LINC00116Q8NCU8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 HSPE1P11-201ENST00000339579 310 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 RNU6-552P-201ENST00000362869 119 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.145-201ENST00000363527 102 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 U3.11-201ENST00000364476 212 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 SNORA33.2-201ENST00000365413 134 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.459-201ENST00000384251 102 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 RNU6-903P-201ENST00000391270 109 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AL590609.2-201ENST00000421430 368 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 Z82205.1-201ENST00000428456 297 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 HSPD1P21-201ENST00000436541 245 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AL353748.1-201ENST00000440753 474 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 RAC1P7-201ENST00000445367 377 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC108059.3-201ENST00000456388 214 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AL445433.1-201ENST00000457507 257 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 RNU7-182P-201ENST00000459009 62 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.635-201ENST00000459041 101 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC126389.1-201ENST00000477436 290 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AL163540.1-201ENST00000485382 386 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 MTCO1P29-201ENST00000496868 288 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC091885.1-201ENST00000506658 268 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC005741.1-201ENST00000511094 432 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 COX6CP3-201ENST00000580869 223 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC011471.1-201ENST00000585766 187 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 NF1P5-201ENST00000588287 448 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AL627309.6-201ENST00000606857 840 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AC103710.2-201ENST00000609912 942 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 MIR7975-201ENST00000619350 68 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 MTCO1P12-201ENST00000414273 1543 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 MAPK10-320ENST00000641462 6696 ntBASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LINC00116Q8NCU8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC015813.6-201ENST00000624409 5808 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.301-201ENST00000364990 103 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 RNU6-641P-201ENST00000384006 107 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.445-201ENST00000384168 102 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 MIR19A-201ENST00000384878 82 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 RNU6-278P-201ENST00000390945 109 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 RN7SKP247-201ENST00000411094 308 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AL591419.1-201ENST00000427423 339 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 MED13P1-201ENST00000428342 171 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AL159987.2-201ENST00000432754 307 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 VN1R17P-201ENST00000472048 1090 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC106707.2-201ENST00000484182 374 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC083904.1-201ENST00000487828 231 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC092436.1-201ENST00000506450 503 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.711-201ENST00000516993 102 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC087369.1-201ENST00000520775 996 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 LSM3P2-201ENST00000551246 273 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC006270.2-201ENST00000578523 652 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 APOOP1-201ENST00000604695 592 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AC016925.2-201ENST00000605108 242 ntBASIC5.04□□□□□ -1.6
LINC00116Q8NCU8 AL080274.1-201ENST00000605565 220 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms