Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SNORA31-201ENST00000362607 130 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RNU6-550P-201ENST00000391057 101 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RPL32P23-201ENST00000397237 405 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 MIR1290-201ENST00000408735 78 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RNU6-628P-201ENST00000410675 107 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RPL36AP53-201ENST00000432891 316 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AL132765.1-201ENST00000434165 553 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 PRDX3P3-201ENST00000447765 522 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RPL38P4-201ENST00000502376 214 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC020593.1-201ENST00000507399 299 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC108475.1-201ENST00000507880 950 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RNU6-507P-201ENST00000516045 100 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RNU6-1038P-201ENST00000516516 104 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 NARSP2-201ENST00000518524 679 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 MTND4P7-201ENST00000523876 130 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC106782.4-201ENST00000568264 210 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 RPL23AP87-202ENST00000573039 466 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC011712.1-201ENST00000588959 234 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 BNIP3P9-201ENST00000603714 553 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AL138889.2-201ENST00000603883 242 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC245389.1-201ENST00000605141 529 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC022893.3-201ENST00000607665 437 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC006504.8-201ENST00000621046 635 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC140479.6-201ENST00000633535 357 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 MTND5P42-201ENST00000637720 498 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 SCN1A-220ENST00000641603 12506 ntBASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNPOQ8N3V7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 Y_RNA.157-201ENST00000363638 102 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 RNU4-46P-201ENST00000410818 138 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 RNU6-193P-201ENST00000410977 107 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AC009161.1-201ENST00000417306 376 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 RPS6P12-201ENST00000432491 726 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 CBWD4P-201ENST00000445695 655 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AC012671.1-201ENST00000451912 203 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 TRBV1-201ENST00000476502 284 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AC117522.3-201ENST00000507974 584 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 SNORA70.16-201ENST00000516390 95 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 BPIFA4P-203ENST00000603168 689 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AC079587.1-201ENST00000603846 277 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 MIR92B-201ENST00000607575 96 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AL390240.1-201ENST00000612950 384 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AP005264.7-201ENST00000625003 745 ntBASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SYNPOQ8N3V7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.69
SYNPOQ8N3V7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 UBE2L2-201ENST00000254302 429 ntBASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 Y_RNA.231-201ENST00000364358 102 ntBASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 Y_RNA.373-201ENST00000365600 103 ntBASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 RNU6-14P-201ENST00000384630 106 ntBASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 RNU6-817P-201ENST00000391083 104 ntBASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 AL162578.1-201ENST00000406202 378 ntBASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 RPS12P24-201ENST00000412619 387 ntBASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNPOQ8N3V7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms