Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MIR135A2-201ENST00000384854 100 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 RNU6-195P-201ENST00000411352 109 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 DBIP2-201ENST00000419076 262 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 RPS3AP44-201ENST00000425466 790 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC006946.1-201ENST00000429106 328 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC119618.1-201ENST00000434191 222 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 TIMM9P1-201ENST00000436122 256 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AL662791.1-201ENST00000441992 928 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 CYCSP35-201ENST00000451978 304 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 MTND1P12-201ENST00000455231 147 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC108059.3-201ENST00000456388 214 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 RPS3AP17-201ENST00000472594 777 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 KLHL2P1-201ENST00000508691 521 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC026801.2-201ENST00000515352 425 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 HMGN1P28-201ENST00000521340 364 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC010546.1-201ENST00000569391 485 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AL391840.1-201ENST00000571144 367 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 KC877982.1-201ENST00000602313 470 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC245014.2-201ENST00000603689 287 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC006077.1-201ENST00000604746 343 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC246785.4-201ENST00000605374 287 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC013476.2-201ENST00000614456 459 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 MIR6130-201ENST00000619419 109 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AC015967.1-201ENST00000619893 476 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 U4.6-201ENST00000621618 127 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 AL732618.1-201ENST00000623251 301 ntBASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN4BQ8IWT1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC007656.2-201ENST00000624902 4547 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 RNY4P16-201ENST00000364768 94 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 SNORD6-201ENST00000365444 73 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 RNU6-432P-201ENST00000384196 109 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 ELOCP17-201ENST00000414751 326 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 BX295541.1-201ENST00000417774 250 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 USP9YP36-201ENST00000424581 829 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC019097.1-201ENST00000424783 735 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 DUTP6-201ENST00000425573 462 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 RPL7P28-201ENST00000437739 740 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 NANOGNBP1-201ENST00000448444 480 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 HMGN2P16-201ENST00000456802 261 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 RNU7-59P-201ENST00000459101 61 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 SRRM1P2-201ENST00000464531 1192 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC020893.1-201ENST00000502452 580 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC107401.1-201ENST00000503426 685 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC010587.1-201ENST00000505809 469 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 HMGB3P15-201ENST00000507326 574 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC091133.4-201ENST00000511142 308 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 IGKV2D-23-201ENST00000518179 286 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AP000857.1-201ENST00000532151 543 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 uc_338.12-201ENST00000616344 181 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AC138649.3-201ENST00000622154 254 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 OR5AK4P-201ENST00000635912 903 ntBASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN4BQ8IWT1 AL672296.1-201ENST00000427780 2158 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms