Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPL17P49-201ENST00000443728 411 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 ELOCP30-201ENST00000447108 299 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 MTND1P29-201ENST00000448112 647 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AP001086.1-201ENST00000494882 321 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 RNU6-840P-201ENST00000517275 65 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC024909.2-201ENST00000553035 286 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AL157394.1-201ENST00000562983 1224 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 MTCYBP33-201ENST00000575007 1130 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 MIR4644-201ENST00000579929 84 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC008250.2-201ENST00000615261 205 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC104010.1-201ENST00000616889 150 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC139792.2-201ENST00000624218 587 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC090582.1-201ENST00000636321 199 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 Y_RNA.553-201ENST00000384670 102 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 UBE2FP1-201ENST00000416536 447 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 FTH1P1-201ENST00000437933 532 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC093156.1-201ENST00000440382 670 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 TAF9P1-201ENST00000445421 515 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 TAF9P2-201ENST00000454958 515 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 SNORD42A-201ENST00000459584 64 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 LARP1BP2-201ENST00000486594 519 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 RPS15AP36-201ENST00000492022 382 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 DEFB108A-201ENST00000530110 222 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC007115.1-201ENST00000546853 234 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC123904.2-201ENST00000548059 300 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 RPL21P5-201ENST00000554662 472 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AL133153.1-201ENST00000557756 303 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 ZNF192P1-203ENST00000565888 810 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC055876.1-202ENST00000567053 138 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC137800.2-201ENST00000574375 120 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 MIR3146-201ENST00000580367 79 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC022146.1-201ENST00000595307 847 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC119751.7-201ENST00000600494 245 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC146944.4-201ENST00000602697 718 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 SEPT7P9-203ENST00000604116 343 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 BX664608.1-201ENST00000610519 487 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 AC092140.2-201ENST00000618027 521 ntBASIC3.89□□□□□ -1.79
HERC6Q8IVU3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.89□□□□□ -1.79
HERC6Q8IVU3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 SNORD17-201ENST00000390930 237 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 UBA52P6-201ENST00000399822 382 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 TXNP7-201ENST00000406296 293 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 ELOCP17-201ENST00000414751 326 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 MORF4L1P6-201ENST00000418771 268 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC137499.1-201ENST00000427602 88 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 BX890604.2-201ENST00000427883 474 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AP000936.2-201ENST00000447151 681 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AL162389.1-201ENST00000449233 177 ntBASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.88□□□□□ -1.79
HERC6Q8IVU3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms