Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL356473.1-201ENST00000406203 1408 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 Y_RNA.234-201ENST00000364409 97 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 HMGN2P30-201ENST00000423237 256 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 TMEM167AP1-201ENST00000423409 219 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 RPL27AP8-201ENST00000424277 446 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 OR10R1P-201ENST00000441524 1141 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC002381.1-201ENST00000447049 280 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 EXOSC3P1-201ENST00000448649 500 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 ZNF886P-201ENST00000450781 723 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 MTND2P39-201ENST00000457230 764 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC097493.1-201ENST00000463958 372 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 RPL30P9-201ENST00000465586 330 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AL049714.1-201ENST00000466686 347 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 RPS27P27-201ENST00000498779 255 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC009901.1-201ENST00000506703 541 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 RNU6-150P-201ENST00000516237 95 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 RNU6-528P-201ENST00000516926 100 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 SNORA31.21-201ENST00000517180 77 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AP000867.2-201ENST00000532468 320 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC023813.2-201ENST00000564321 469 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AL512347.1-201ENST00000566420 503 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AL451007.1-201ENST00000595491 289 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 RPL23AP78-201ENST00000599928 470 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 BNIP3P26-201ENST00000600827 554 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC011330.2-201ENST00000621680 635 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC008443.7-201ENST00000622195 246 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC027309.3-201ENST00000623419 351 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 AC091564.4-201ENST00000533934 2194 ntBASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC50Q8IVM0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.97
CCDC50Q8IVM0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 DEFB108F-201ENST00000344638 222 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 RNU6-413P-201ENST00000384115 107 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 SNORA1.3-201ENST00000384676 136 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 SNORA48.2-201ENST00000390926 124 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 RNU6-1197P-201ENST00000391183 107 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AL356320.2-201ENST00000417263 507 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 TIMM9P2-201ENST00000419324 266 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC090774.1-201ENST00000435925 246 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 LSM1P1-201ENST00000438629 273 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC010099.1-201ENST00000455434 375 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC080014.1-201ENST00000496877 1201 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 SEM1P1-201ENST00000506694 209 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC021146.8-201ENST00000507455 733 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 OR10V3P-201ENST00000525712 725 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 DEFB108D-201ENST00000527787 222 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 MTCYBP23-201ENST00000558717 1102 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC090615.1-201ENST00000577519 154 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC011260.1-201ENST00000578420 472 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 MIR4446-201ENST00000578505 67 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 BNIP3P33-201ENST00000598912 569 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC011890.2-201ENST00000613393 294 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC090132.2-201ENST00000615881 347 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 AC116618.1-201ENST00000634617 774 ntBASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC50Q8IVM0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 RNU6-560P-201ENST00000364007 108 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 SNORA70.4-201ENST00000365509 134 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 RNU6-76P-201ENST00000384060 104 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 ERHP2-201ENST00000402323 299 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 RNA5SP21-201ENST00000410917 96 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 RPS3AP37-201ENST00000419176 745 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 ATP5F1P1-201ENST00000433775 569 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 MTND4P6-201ENST00000438297 472 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 RPS24P13-201ENST00000442520 397 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 CACYBPP2-201ENST00000453625 678 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 FCF1P6-201ENST00000456841 595 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 HMGB1P36-201ENST00000487709 576 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AL049874.1-201ENST00000489560 388 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AL359273.1-201ENST00000510918 627 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 TTC39CP1-201ENST00000512513 755 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC022483.1-201ENST00000514020 567 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms