Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 C4BPAP2-201ENST00000428434 478 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 MTATP6P16-201ENST00000434543 526 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AL137792.2-201ENST00000443484 235 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 RPL32P28-201ENST00000443577 397 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC022431.1-201ENST00000450941 438 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 AP001992.1-205ENST00000462248 379 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 RPL5P30-201ENST00000465511 891 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AL049714.1-201ENST00000466686 347 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC126389.1-201ENST00000477436 290 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC005726.1-201ENST00000494679 427 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 VWA8P1-201ENST00000510889 176 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 Y_RNA.720-201ENST00000517166 92 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC103843.2-201ENST00000530523 682 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC063950.1-201ENST00000552036 308 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 SNRPGP18-201ENST00000553000 214 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 NCAPGP2-201ENST00000557911 754 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 SULT1C2P2-201ENST00000562517 294 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 MIR3668-201ENST00000582138 75 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC245389.1-201ENST00000605141 529 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC019193.3-201ENST00000609144 554 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AC000123.2-201ENST00000623124 461 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AL359757.2-201ENST00000624309 274 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 AL159972.1-201ENST00000625150 448 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 MIR6830-201ENST00000636015 70 ntBASIC4.08□□□□□ -1.76
VRK3Q8IV63 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRK3Q8IV63 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRK3Q8IV63 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK3Q8IV63 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VRK3Q8IV63 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 HSPE1P11-201ENST00000339579 310 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 RNU6-552P-201ENST00000362869 119 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 Y_RNA.373-201ENST00000365600 103 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 RNU6-196P-201ENST00000384315 107 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 SNORA37-201ENST00000384504 129 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 MTCYBP4-201ENST00000401524 249 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 RPL23AP48-201ENST00000406913 488 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 RPL7L1P10-201ENST00000427790 463 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 SNRPEP4-201ENST00000435815 279 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 PTMAP3-201ENST00000447474 330 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC104073.1-201ENST00000451988 151 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 RNA5SP246-201ENST00000458909 119 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 RNU7-180P-201ENST00000459240 63 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 RPS27AP13-201ENST00000498403 237 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC092436.1-201ENST00000506450 503 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC093853.1-201ENST00000515689 483 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 AP001804.3-201ENST00000525146 880 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 APOOP3-201ENST00000536787 586 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 RPL21P12-201ENST00000559810 515 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC100830.2-201ENST00000581636 240 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 MIR4503-201ENST00000582187 83 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AC015813.4-201ENST00000610469 179 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 MIR8059-201ENST00000620427 81 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
VRK3Q8IV63 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 AL445437.1-201ENST00000623157 3087 ntBASIC4.07□□□□□ -1.76
VRK3Q8IV63 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK3Q8IV63 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC007823.1-201ENST00000569932 1566 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AL138713.1-201ENST00000624026 2130 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms