Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 RNU6-953P-201ENST00000459154 107 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AC092754.1-201ENST00000472975 479 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 RAB9BP1-201ENST00000519581 626 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AC103783.1-201ENST00000520506 373 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AL442163.3-201ENST00000554110 156 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 MIR6837-201ENST00000620884 64 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AC243829.7-201ENST00000633081 225 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 AC006484.1-201ENST00000435086 1884 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 MTND5P9-201ENST00000503854 1755 ntBASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LYSMD3Q7Z3D4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 U3.7-201ENST00000363668 216 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 U3.13-201ENST00000364804 214 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 RNY4P28-201ENST00000365281 93 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 MIR1286-201ENST00000408112 78 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 ISCUP1-201ENST00000454451 448 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 RN7SL799P-201ENST00000475891 298 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AC012123.2-201ENST00000485809 248 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 MRPL42P6-201ENST00000486397 371 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AC091144.1-201ENST00000519573 138 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 MIR3144-201ENST00000579460 79 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 FKBP1AP1-201ENST00000594588 318 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AL078605.1-201ENST00000603529 500 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AC098826.3-201ENST00000603823 466 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 AL590240.4-201ENST00000616908 390 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 MIR6719-201ENST00000622428 87 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 SAGE4P-201ENST00000442271 3381 ntBASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.41□□□□□ -1.54
LYSMD3Q7Z3D4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC020633.1-201ENST00000468439 2247 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 Y_RNA.8-201ENST00000362353 102 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 RNU1-19P-201ENST00000363306 165 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 SNORA74A-201ENST00000364089 198 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 RNU6-817P-201ENST00000391083 104 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 TMEM167AP1-201ENST00000423409 219 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC007389.2-201ENST00000434630 306 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 snoU109.4-201ENST00000458953 143 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 COX6CP14-201ENST00000469580 174 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 RN7SL30P-201ENST00000488416 306 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 RPL7P47-201ENST00000497299 556 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 MIR4675-201ENST00000577898 77 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 MIR1269B-201ENST00000580405 75 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC108738.1-201ENST00000603703 237 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 IMMP1LP3-201ENST00000604197 224 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC109583.2-201ENST00000617367 129 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 uc_338.7-201ENST00000621834 124 ntBASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.4□□□□□ -1.54
LYSMD3Q7Z3D4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 AC092747.4-201ENST00000620519 1861 ntBASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 AC073136.1-201ENST00000449426 2884 ntBASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms