Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC036111.3-201ENST00000526389 112 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 AC012640.5-201ENST00000623897 319 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS13CQ709C8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
VPS13CQ709C8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
VPS13CQ709C8 AL445213.1-201ENST00000412589 747 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 AIMP1P2-201ENST00000425294 312 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 RPL23AP78-201ENST00000599928 470 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS13CQ709C8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
VPS13CQ709C8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS13CQ709C8 AL691517.1-201ENST00000440833 1235 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 NEFMP1-201ENST00000443423 1006 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS13CQ709C8 AL109741.2-201ENST00000455561 343 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.05□□□□□ -2.24
VPS13CQ709C8 AC006483.1-201ENST00000487308 313 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS13CQ709C8 AC007375.1-201ENST00000554513 578 ntBASIC1.05□□□□□ -2.24
VPS13CQ709C8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.05□□□□□ -2.24
VPS13CQ709C8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 EBAG9P1-201ENST00000418955 543 ntBASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC018630.2-202ENST00000422992 927 ntBASIC1.04□□□□□ -2.24
VPS13CQ709C8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC090821.2-201ENST00000523552 176 ntBASIC1.04□□□□□ -2.24
VPS13CQ709C8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC010487.4-201ENST00000637027 61 ntBASIC1.04□□□□□ -2.24
VPS13CQ709C8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS13CQ709C8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 Y_RNA.274-201ENST00000364714 101 ntBASIC1.04□□□□□ -2.24
VPS13CQ709C8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC011890.2-201ENST00000613393 294 ntBASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
VPS13CQ709C8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13CQ709C8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS13CQ709C8 AC023790.1-201ENST00000482174 347 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 KATNBL1P4-201ENST00000503545 918 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.24
VPS13CQ709C8 AC092451.2-201ENST00000538746 658 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13CQ709C8 AC011472.4-201ENST00000615848 491 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 AC098657.3-201ENST00000620434 263 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13CQ709C8 MIR193B-201ENST00000384907 83 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 RNA5SP489-201ENST00000410986 109 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 AL096701.2-201ENST00000416920 238 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 AL078601.1-201ENST00000444542 271 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 VN1R107P-201ENST00000601784 209 ntBASIC1.03□□□□□ -2.24
VPS13CQ709C8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS13CQ709C8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS13CQ709C8 AC019155.1-201ENST00000382242 574 ntBASIC1.03□□□□□ -2.25
VPS13CQ709C8 RNU1-148P-201ENST00000384472 162 ntBASIC1.03□□□□□ -2.25
VPS13CQ709C8 HMGN2P35-201ENST00000412164 270 ntBASIC1.03□□□□□ -2.25
VPS13CQ709C8 RPS27AP10-201ENST00000496103 208 ntBASIC1.03□□□□□ -2.25
VPS13CQ709C8 AC022447.3-201ENST00000506865 495 ntBASIC1.03□□□□□ -2.25
VPS13CQ709C8 Y_RNA.675-201ENST00000516389 149 ntBASIC1.03□□□□□ -2.25
VPS13CQ709C8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.25
VPS13CQ709C8 AC006329.2-201ENST00000611491 394 ntBASIC1.03□□□□□ -2.25
VPS13CQ709C8 MFSD8-213ENST00000641134 1327 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13CQ709C8 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 AL159169.2-201ENST00000610061 1269 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
VPS13CQ709C8 AP004607.1-201ENST00000524456 203 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 AC116447.1-201ENST00000613153 453 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
VPS13CQ709C8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS13CQ709C8 RPL31P35-201ENST00000431058 377 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 SNRPFP3-201ENST00000457792 225 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 AC073901.1-201ENST00000462471 408 ntBASIC1.02□□□□□ -2.25
VPS13CQ709C8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13CQ709C8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.02□□□□□ -2.25
VPS13CQ709C8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
VPS13CQ709C8 AC007342.9-201ENST00000623877 1385 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 IFNWP4-201ENST00000453148 294 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 RPL21P131-201ENST00000497298 483 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 MTND5P21-201ENST00000531961 522 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AL354685.2-201ENST00000448218 1447 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 Y_RNA.60-201ENST00000362831 98 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 RNU6-198P-201ENST00000384258 104 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 AC010928.2-201ENST00000588017 287 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AP001029.3-201ENST00000588063 596 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AL020996.3-201ENST00000606617 222 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VPS13CQ709C8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 RPL5P19-201ENST00000404228 893 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS13CQ709C8 AL445687.1-201ENST00000439946 251 ntBASIC1.01□□□□□ -2.25
VPS13CQ709C8 AC005912.1-201ENST00000495392 255 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms