Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 KCTD9P3-201ENST00000434597 1169 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AL589765.3-201ENST00000446084 462 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RN7SL98P-201ENST00000462271 300 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RN7SL810P-201ENST00000493031 276 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RPL23AP55-201ENST00000498163 452 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 MIR2116-201ENST00000517221 80 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC008694.2-201ENST00000517591 306 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC093012.1-202ENST00000549403 582 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AL445567.2-201ENST00000618935 498 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AL357559.1-201ENST00000622228 274 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC243312.2-201ENST00000623340 601 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC110801.1-201ENST00000623590 212 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC090337.1-201ENST00000579651 2074 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 BTF3L4P3-201ENST00000418879 476 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AL139095.3-201ENST00000419672 1203 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC099677.1-201ENST00000420575 175 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 MTCO2P12-201ENST00000427426 682 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 NDUFA5P4-201ENST00000436704 385 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 MTCYBP6-201ENST00000441810 138 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 PHBP16-201ENST00000446318 950 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 PTMAP3-201ENST00000447474 330 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 NUTF2P3-201ENST00000448540 384 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.632-201ENST00000459189 102 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC104806.1-201ENST00000508720 308 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC108078.2-201ENST00000510750 236 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-864P-201ENST00000516256 108 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC018630.1-201ENST00000541376 925 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC010680.4-201ENST00000605334 543 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AC092807.2-201ENST00000609367 243 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 AL645937.1-201ENST00000641739 1652 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 CPHL1P-201ENST00000461341 3407 ntBASIC4.98□□□□□ -1.61
RUFY4Q6ZNE9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 RNU1-108P-201ENST00000362556 161 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-1249P-201ENST00000363237 111 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-263P-201ENST00000363811 107 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.301-201ENST00000364990 103 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 MIR135A2-201ENST00000384854 100 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 RNU4-78P-201ENST00000410940 126 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC011933.1-201ENST00000413334 321 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 EIF4EP1-201ENST00000422311 642 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC018630.2-202ENST00000422992 927 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC011998.1-201ENST00000433403 117 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 CKS1BP5-201ENST00000434172 273 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC116533.1-201ENST00000459748 321 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 TRBVA-201ENST00000498804 316 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC026402.1-201ENST00000513642 170 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-685P-201ENST00000517088 95 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 RANP3-201ENST00000530970 276 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AL121821.2-201ENST00000556081 394 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 MTCO3P13-201ENST00000577757 781 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms