Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RPL23P2-201ENST00000320371 421 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 Y_RNA.39-201ENST00000362620 98 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RNU6-1155P-201ENST00000363554 107 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RNA5SP428-201ENST00000365129 132 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RNU6-842P-201ENST00000384269 107 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 Y_RNA.512-201ENST00000384518 102 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MIR223-201ENST00000385204 110 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AL590704.1-201ENST00000402856 794 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RNU4-78P-201ENST00000410940 126 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MRPS18CP6-201ENST00000423587 223 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 UBE2V1P4-201ENST00000425374 344 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC099799.1-201ENST00000439809 192 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC068781.1-201ENST00000488231 618 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RN7SL30P-201ENST00000488416 306 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RPL22P13-201ENST00000493291 347 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MRPS33P2-201ENST00000507850 322 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC107222.1-201ENST00000510899 637 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RNA5SP360-201ENST00000516555 118 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC090151.1-201ENST00000520784 730 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC022882.1-201ENST00000532142 501 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MIR1269B-201ENST00000580405 75 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 RN7SL52P-201ENST00000584271 284 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC005357.1-201ENST00000588399 301 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC012669.1-201ENST00000603209 283 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MIR6768-201ENST00000610734 72 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AC022467.1-201ENST00000614738 749 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 HMGB1P24-202ENST00000615653 685 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MIR8069-1-201ENST00000616627 86 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MIR8069-2-201ENST00000621412 86 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 MIR4302-201ENST00000638058 60 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 AL451142.2-201ENST00000429076 2090 ntBASIC4.73□□□□□ -1.65
LETMD1Q6P1Q0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RNU6-1303P-201ENST00000364841 107 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 Y_RNA.380-201ENST00000365663 111 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RNU1-106P-201ENST00000384382 164 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 U3.35-201ENST00000408405 208 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC096664.2-201ENST00000411843 406 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RPS27AP12-201ENST00000429552 465 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC090774.1-201ENST00000435925 246 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 PCNPP5-201ENST00000452246 481 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AL353752.1-201ENST00000454946 260 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC112492.4-201ENST00000456549 352 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RNU7-187P-201ENST00000458985 68 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RNU7-138P-201ENST00000459479 64 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RN7SL515P-201ENST00000463999 297 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RN7SL97P-201ENST00000486780 299 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 SLC25A15P5-201ENST00000508033 253 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 RN7SKP234-201ENST00000517173 224 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CDH12P4-201ENST00000517835 295 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CDH12P3-201ENST00000517935 295 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CDH12P1-201ENST00000518435 295 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC092490.3-201ENST00000545370 572 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 AL355297.3-201ENST00000604082 446 ntBASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LETMD1Q6P1Q0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms