Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 Y_RNA.436-201ENST00000384097 102 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 PPIAP31-201ENST00000405422 495 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AL590383.1-201ENST00000428602 75 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 VN1R108P-201ENST00000431580 830 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC140076.1-201ENST00000449897 361 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 RPL21P11-201ENST00000461458 483 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC084198.1-201ENST00000477747 402 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 RN7SKP21-201ENST00000516503 220 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 RN7SKP209-201ENST00000516888 304 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 NRON-201ENST00000517270 370 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC128657.1-201ENST00000549459 145 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC006566.1-201ENST00000608943 513 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC103710.2-201ENST00000609912 942 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC110801.1-201ENST00000623590 212 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC110994.2-201ENST00000635481 492 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC38Q502W7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC38Q502W7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AC118273.1-201ENST00000525324 3006 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC38Q502W7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC38Q502W7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC38Q502W7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC38Q502W7 Y_RNA.126-201ENST00000363382 111 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 RNU6-511P-201ENST00000363496 107 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 Y_RNA.194-201ENST00000363985 102 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 Y_RNA.359-201ENST00000365498 102 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC38Q502W7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 RNU6-1119P-201ENST00000384349 108 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 PTMAP5-201ENST00000393073 333 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 DEFB108C-201ENST00000400154 252 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 RN7SKP140-201ENST00000411196 284 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 HMGB3P23-201ENST00000414981 585 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 OR4C10P-201ENST00000434991 931 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 MTCO2P7-201ENST00000446518 666 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AP002884.2-201ENST00000471647 395 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 MTCO3P7-201ENST00000510008 774 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 RNU2-10P-201ENST00000516375 211 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC124947.2-202ENST00000552735 133 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 AL137849.1-201ENST00000604767 169 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 AL390240.1-201ENST00000612950 384 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC090132.2-201ENST00000615881 347 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 MIR6500-201ENST00000622700 86 ntBASIC3.91□□□□□ -1.78
CCDC38Q502W7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC38Q502W7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC38Q502W7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CCDC38Q502W7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC38Q502W7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC38Q502W7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC38Q502W7 SPRR2C-201ENST00000290702 219 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 RNU1-13P-201ENST00000384499 162 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AL391417.1-201ENST00000404100 426 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 RNU6-628P-201ENST00000410675 107 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC127391.1-201ENST00000411737 98 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 AC007390.1-201ENST00000415722 356 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC38Q502W7 C1DP2-201ENST00000418167 426 ntBASIC3.9□□□□□ -1.79
CCDC38Q502W7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms